RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ZBTB2Q8N680 514 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 SIDT2Q8NBJ9 832 aaKnown RBP17.06■□□□□ 0.32
TPM1-214ENST00000558544 UHMK1Q8TAS1 419 aaKnown RBP17.06■□□□□ 0.32
TPM1-214ENST00000558544 ASZ1Q8WWH4 475 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 KCNJ9Q92806 393 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 NAT6Q93015 286 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 CXorf40BQ96DE9 158 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 GPR21Q99679 349 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 SLC30A3Q99726 388 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 CPNE1Q99829 537 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 TXLNGYQ9BZA5 131 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 STN1Q9H668 368 aaKnown RBP17.06■□□□□ 0.32
TPM1-214ENST00000558544 IMP3Q9NV31 184 aaKnown RBP17.06■□□□□ 0.32
TPM1-214ENST00000558544 TXNDC16Q9P2K2 825 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 LRIT1Q9P2V4 623 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 CPNE7Q9UBL6 633 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 RABGEF1Q9UJ41 708 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 TSR3Q9UJK0 312 aaKnown RBP17.06■□□□□ 0.32
TPM1-214ENST00000558544 CDYLQ9Y232 598 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 COL27A1Q8IZC6 1860 aaPredicted RBP17.06■□□□□ 0.32
TPM1-214ENST00000558544 PRAMEF33A0A0G2JMD5 474 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 IFRD1O00458 451 aaPredicted RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 KPNA5O15131 536 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 PPM1DO15297 605 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 NUDT21O43809 227 aaKnown RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 VPS26AO75436 327 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 GPC4O75487 556 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 VIPP01282 170 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 FTH1P19P0C7X4 201 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 MTHFD1P11586 935 aaKnown RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 XRCC1P18887 633 aaPredicted RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 ID4P47928 161 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 FASLGP48023 281 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 CLCN7P51798 805 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 PLOD1Q02809 727 aaPredicted RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 HECTD2Q5U5R9 776 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 CAPRIN2Q6IMN6 1127 aaKnown RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 WDR93Q6P2C0 686 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 TRMT10CQ7L0Y3 403 aaKnown RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 PDZD3Q86UT5 571 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 ZC3HC1Q86WB0 502 aaKnown RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 ZNF761Q86XN6 746 aaPredicted RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 OR6C4Q8NGE1 309 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 GIMAP7Q8NHV1 300 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.05■□□□□ 0.32
TPM1-214ENST00000558544 MRRFQ96E11 262 aaKnown RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 CYTH2Q99418 400 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 FUT8Q9BYC5 575 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 RHOJQ9H4E5 214 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 ACSS3Q9H6R3 686 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 CORO1CQ9ULV4 474 aaPredicted RBP17.05■□□□□ 0.32
TPM1-214ENST00000558544 UNC13CQ8NB66 2214 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 PTPRBP23467 1997 aa17.05■□□□□ 0.32
TPM1-214ENST00000558544 FAM95CA0A1B0GW59 222 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 RHPN2P1A8MT19 583 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 RIPK2O43353 540 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 RFPL3O75679 317 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 FAM155BO75949 473 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 GP5P40197 560 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 CDKN2DP55273 166 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 TIAL1Q01085 375 aaKnown RBP eCLIP17.04■□□□□ 0.329e-7■■■□□ 18.9
TPM1-214ENST00000558544 NAB1Q13506 487 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 PPM1JQ5JR12 505 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 PLEKHS1Q5SXH7 462 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 FAM45BPQ6NSW5 357 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 SLCO6A1Q86UG4 719 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 PIM3Q86V86 326 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 SLC22A15Q8IZD6 547 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 ACVR1CQ8NER5 493 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 FAM45AQ8TCE6 357 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 CD200R1Q8TD46 325 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 VPS39Q96JC1 886 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 ELMO2Q96JJ3 720 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 RBBP8Q99708 897 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 CCDC3Q9BQI4 270 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 MCMBPQ9BTE3 642 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 PARD6BQ9BYG5 372 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 LATS2Q9NRM7 1088 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 POT1Q9NUX5 634 aa17.04■□□□□ 0.32
TPM1-214ENST00000558544 A0A087WUV0 522 aaPredicted RBP17.03■□□□□ 0.32
TPM1-214ENST00000558544 CASC3O15234 703 aaKnown RBP17.03■□□□□ 0.32
TPM1-214ENST00000558544 SLCO2B1O94956 709 aa17.03■□□□□ 0.32
TPM1-214ENST00000558544 SAT1P21673 171 aa17.03■□□□□ 0.32
TPM1-214ENST00000558544 PGGT1BP53609 377 aa17.03■□□□□ 0.32
TPM1-214ENST00000558544 UAP1Q16222 522 aaPredicted RBP17.03■□□□□ 0.32
TPM1-214ENST00000558544 ZNF438Q7Z4V0 828 aa17.03■□□□□ 0.32
TPM1-214ENST00000558544 Q8N9G6 341 aaPredicted RBP17.03■□□□□ 0.32
TPM1-214ENST00000558544 AVL9Q8NBF6 648 aa17.03■□□□□ 0.32
TPM1-214ENST00000558544 OLFM1Q99784 485 aa17.03■□□□□ 0.32
TPM1-214ENST00000558544 TAS2R13Q9NYV9 303 aa17.03■□□□□ 0.32
TPM1-214ENST00000558544 TRMT6Q9UJA5 497 aaKnown RBP17.03■□□□□ 0.32
TPM1-214ENST00000558544 DHRS7Q9Y394 339 aa17.03■□□□□ 0.32
TPM1-214ENST00000558544 ANKRD12Q6UB98 2062 aa17.03■□□□□ 0.32
TPM1-214ENST00000558544 GP1BAP07359 652 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 ABHD2P08910 425 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 PNLIPP16233 465 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 FDXRP22570 491 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 MCM3P25205 808 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 ACADLP28330 430 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms