RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PLCL1Q15111 1095 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 CLPPQ16740 277 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-205ENST00000558428 HSP90AA5PQ58FG0 334 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 CTSL3PQ5NE16 218 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 PHF19Q5T6S3 580 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 UNC5AQ6ZN44 842 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 ANKMY2Q8IV38 441 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 SLITRK4Q8IW52 837 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 UNC5BQ8IZJ1 945 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 FBXO36Q8NEA4 188 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 GABPB2Q8TAK5 448 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-205ENST00000558428 NCSTNQ92542 709 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 TMEM159Q96B96 161 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 GRAMD1AQ96CP6 724 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 NXPE2Q96DL1 559 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 DPYSL5Q9BPU6 564 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 WDR83Q9BRX9 315 aaKnown RBP12.07□□□□□ -0.48
SMAD3-205ENST00000558428 FAM167BQ9BTA0 163 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 TMEM121BQ9BXQ6 578 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-205ENST00000558428 STRADBQ9C0K7 418 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 SEMA6CQ9H3T2 930 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 EPB41L1Q9H4G0 881 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 FBXO6Q9NRD1 293 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-205ENST00000558428 INTS10Q9NVR2 710 aaKnown RBP12.07□□□□□ -0.48
SMAD3-205ENST00000558428 TEX264Q9Y6I9 313 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 COLEC10Q9Y6Z7 277 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 IGF2RP11717 2491 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 H3BMM5 538 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 UBXN7O94888 489 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 S1PR4O95977 384 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 ESR1P03372 595 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 APOA4P06727 396 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 PROS1P07225 676 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 HOXB3P14651 431 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-205ENST00000558428 TYRP1P17643 537 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 NDUFS1P28331 727 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 CCKBRP32239 447 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 PLTPP55058 493 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 ADARP55265 1226 aaKnown RBP12.06□□□□□ -0.48
SMAD3-205ENST00000558428 CAV1Q03135 178 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 CFHR1Q03591 330 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 ZFP36L1Q07352 338 aaKnown RBP12.06□□□□□ -0.48
SMAD3-205ENST00000558428 HSPA14Q0VDF9 509 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 SQSTM1Q13501 440 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 FASTKD3Q14CZ7 662 aaKnown RBP12.06□□□□□ -0.48
SMAD3-205ENST00000558428 TMED2Q15363 201 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 ZNF789Q5FWF6 425 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 C3orf38Q5JPI3 329 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 STEAP4Q687X5 459 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 TMEM71Q6P5X7 295 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 ZNF574Q6ZN55 896 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-205ENST00000558428 PDZD3Q86UT5 571 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 ZBED8Q8IZ13 594 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 MMGT1Q8N4V1 131 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 OR4D9Q8NGE8 314 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 ASZ1Q8WWH4 475 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 JPH3Q8WXH2 748 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-205ENST00000558428 CERS2Q96G23 380 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 LIN37Q96GY3 246 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-205ENST00000558428 BIRC8Q96P09 236 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 FERD3LQ96RJ6 166 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 NRSN2Q9GZP1 204 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 CCDC68Q9H2F9 335 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 PLAC1Q9HBJ0 212 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 SAYSD1Q9NPB0 183 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 PPANQ9NQ55 473 aaKnown RBP12.06□□□□□ -0.48
SMAD3-205ENST00000558428 TMEM9Q9P0T7 183 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 FBXO5Q9UKT4 447 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 SATB2Q9UPW6 733 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 AK5Q9Y6K8 562 aa12.06□□□□□ -0.48
SMAD3-205ENST00000558428 MAP1BP46821 2468 aaKnown RBP12.05□□□□□ -0.48
SMAD3-205ENST00000558428 APC2O95996 2303 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 CCDC187A0A096LP49 1063 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 IGHV5-10-1A0A0J9YXX1 117 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 ESYT3A0FGR9 886 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 E5RI56 91 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 AGRPO00253 132 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 KPNA5O15131 536 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 EIF3HO15372 352 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMAD3-205ENST00000558428 NIPSNAP2O75323 286 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 MPOP05164 745 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 PKMP14618 531 aaKnown RBP12.05□□□□□ -0.48
SMAD3-205ENST00000558428 CHRM3P20309 590 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 MPSTP25325 297 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 AOAHP28039 575 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 LIMK2P53671 638 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 GABREP78334 506 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 MPP1Q00013 466 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 GUCY2DQ02846 1103 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 CYP4F3Q08477 520 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 RTP5Q14D33 572 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 TRADDQ15628 312 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 SNAP47Q5SQN1 464 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 FOXR1Q6PIV2 292 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 WDR74Q6RFH5 385 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-205ENST00000558428 OTOAQ7RTW8 1153 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 CEP112Q8N8E3 955 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 NOA1Q8NC60 698 aaKnown RBP12.05□□□□□ -0.48
SMAD3-205ENST00000558428 PHC3Q8NDX5 983 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 WDR36Q8NI36 951 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms