RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 RPL3P39023 403 aaKnown RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 HSPA7P48741 367 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 ADGRE1Q14246 886 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 NADK2Q4G0N4 442 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 ZNF627Q7L945 461 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 PIWIL1Q96J94 861 aaKnown RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 KAT8Q9H7Z6 458 aaKnown RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 NECTIN3Q9NQS3 549 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 GMEB2Q9UKD1 530 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 RHPN2P1A8MT19 583 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 SLC9A3R1O14745 358 aaPredicted RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 PGAM2P15259 253 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 CD36P16671 472 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 CRYBG2Q8N1P7 616 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 TMEM203Q969S6 136 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 KCTD15Q96SI1 283 aaPredicted RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 LRTM1Q9HBL6 345 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 CPED1A4D0V7 1026 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 MYCLP1P12525 358 aaPredicted RBP13.77□□□□□ -0.2
SPG11-210ENST00000558319 GNPDA1P46926 289 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 ADAM8P78325 824 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 MRPS5P82675 430 aaKnown RBP13.77□□□□□ -0.2
SPG11-210ENST00000558319 GCNT6Q5T4J0 391 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 RGMBQ6NW40 437 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 ZNF598Q86UK7 904 aaKnown RBP13.77□□□□□ -0.2
SPG11-210ENST00000558319 Q8N9G6 341 aaPredicted RBP13.77□□□□□ -0.2
SPG11-210ENST00000558319 C12orf43Q96C57 262 aaKnown RBP13.77□□□□□ -0.2
SPG11-210ENST00000558319 CENPNQ96H22 339 aaPredicted RBP13.77□□□□□ -0.2
SPG11-210ENST00000558319 FGFBP2Q9BYJ0 223 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 IFNA7P01567 189 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 PPM1AP35813 382 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 NFATC2Q13469 925 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 ADAMTSL2Q86TH1 951 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 ZNF611Q8N823 705 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 CEP76Q8TAP6 659 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.2
SPG11-210ENST00000558319 SLC22A4Q9H015 551 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 AMBNQ9NP70 447 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 UPB1Q9UBR1 384 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 CAMSAP1Q5T5Y3 1602 aa13.77□□□□□ -0.2
SPG11-210ENST00000558319 CABYRO75952 493 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 CD48P09326 243 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 HERC3Q15034 1050 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 HECTD2Q5U5R9 776 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 GPR153Q6NV75 609 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 CERS5Q8N5B7 392 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 ZNF548Q8NEK5 533 aaPredicted RBP13.77□□□□□ -0.21
SPG11-210ENST00000558319 OR7D4Q8NG98 312 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 CYB5D2Q8WUJ1 264 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 IFT80Q9P2H3 777 aaPredicted RBP13.77□□□□□ -0.21
SPG11-210ENST00000558319 SMIM30A4D0T7 59 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 URADA6NGE7 173 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 B4DGG1 531 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 C2P06681 752 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 SLC2A2P11168 524 aaPredicted RBP13.77□□□□□ -0.21
SPG11-210ENST00000558319 ERVK-21P61565 698 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 IL23RQ5VWK5 629 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 DGLUCYQ7Z3D6 616 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 GATAD2BQ8WXI9 593 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 RNF121Q9H920 327 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 TVP23BQ9NYZ1 205 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 XKRYO14609 159 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 TGDSO95455 350 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 ARL3P36405 182 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 AFF1P51825 1210 aaKnown RBP13.77□□□□□ -0.21
SPG11-210ENST00000558319 TIGD6Q17RP2 521 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 ZPBP2Q6X784 338 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 ZNF782Q6ZMW2 699 aaPredicted RBP13.77□□□□□ -0.21
SPG11-210ENST00000558319 ANKRD23Q86SG2 305 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 UFD1Q92890 307 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 TTPALQ9BTX7 342 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 PCDHAC1Q9H158 963 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 LIN28AQ9H9Z2 209 aaKnown RBP13.77□□□□□ -0.21
SPG11-210ENST00000558319 RIPK3Q9Y572 518 aa13.77□□□□□ -0.21
SPG11-210ENST00000558319 GLYATL1P3A0A0U1RQE8 302 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 MYOCOSA0A1B0GUC4 107 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 TCRBV7S2A1N4TA0A589 114 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 H3BSA7 217 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 OR1I1O60431 355 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 PRAMEF1O95521 474 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 EIF1AXP47813 144 aaKnown RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 PLA2G16P53816 162 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 DRG2P55039 364 aaKnown RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 WNT3AP56704 352 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 SLC13A2Q13183 592 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 ODF4Q2M2E3 257 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 INO80EQ8NBZ0 244 aaPredicted RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 RASSF5Q8WWW0 418 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 HAS1Q92839 578 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 TRMT61BQ9BVS5 477 aaKnown RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 KCNN2Q9H2S1 579 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 POLE4Q9NR33 117 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 TMEM5Q9Y2B1 443 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 ANXA2P2A6NMY6 339 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 MFSD11O43934 449 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 ANXA2P07355 339 aaKnown RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 TSHRP16473 764 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 ILF2Q12905 390 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms