RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 TMPRSS7Q7RTY8 843 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 VRK3Q8IV63 474 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 CNTN4Q8IWV2 1026 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 AVL9Q8NBF6 648 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 GABPB2Q8TAK5 448 aaPredicted RBP14.01□□□□□ -0.17
USP3-205ENST00000557884 TMEM159Q96B96 161 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 SH3KBP1Q96B97 665 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 PANX3Q96QZ0 392 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 GFM1Q96RP9 751 aaKnown RBP14.01□□□□□ -0.17
USP3-205ENST00000557884 NDNQ99608 321 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 SCNM1Q9BWG6 230 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 FOXP3Q9BZS1 431 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 PHACTR1Q9C0D0 580 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 CCDC68Q9H2F9 335 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 SLC40A1Q9NP59 571 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 POT1Q9NUX5 634 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 GALPQ9UBC7 116 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 MTRF1LQ9UGC7 380 aaKnown RBP14.01□□□□□ -0.17
USP3-205ENST00000557884 WASF3Q9UPY6 502 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 CLCA2Q9UQC9 943 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 D6RAR5 112 aa14□□□□□ -0.17
USP3-205ENST00000557884 E5RI56 91 aa14□□□□□ -0.17
USP3-205ENST00000557884 H3BMM5 538 aa14□□□□□ -0.17
USP3-205ENST00000557884 NTN3O00634 580 aaPredicted RBP14□□□□□ -0.17
USP3-205ENST00000557884 AHSGP02765 367 aa14□□□□□ -0.17
USP3-205ENST00000557884 APOA4P06727 396 aa14□□□□□ -0.17
USP3-205ENST00000557884 TYRP1P17643 537 aa14□□□□□ -0.17
USP3-205ENST00000557884 CD1CP29017 333 aa14□□□□□ -0.17
USP3-205ENST00000557884 ECHS1P30084 290 aa14□□□□□ -0.17
USP3-205ENST00000557884 LEPRP48357 1165 aaKnown RBP14□□□□□ -0.17
USP3-205ENST00000557884 CD151P48509 253 aa14□□□□□ -0.17
USP3-205ENST00000557884 ADARP55265 1226 aaKnown RBP14□□□□□ -0.17
USP3-205ENST00000557884 GPX6P59796 221 aa14□□□□□ -0.17
USP3-205ENST00000557884 TARDBPQ13148 414 aaKnown RBP eCLIP14□□□□□ -0.17
USP3-205ENST00000557884 TMED2Q15363 201 aa14□□□□□ -0.17
USP3-205ENST00000557884 MAP9Q49MG5 647 aa14□□□□□ -0.17
USP3-205ENST00000557884 RBM44Q6ZP01 1051 aaKnown RBP14□□□□□ -0.17
USP3-205ENST00000557884 C3orf62Q6ZUJ4 267 aa14□□□□□ -0.17
USP3-205ENST00000557884 OTOAQ7RTW8 1153 aa14□□□□□ -0.17
USP3-205ENST00000557884 PDZD3Q86UT5 571 aa14□□□□□ -0.17
USP3-205ENST00000557884 TMPRSS12Q86WS5 348 aa14□□□□□ -0.17
USP3-205ENST00000557884 GALNT15Q8N3T1 639 aa14□□□□□ -0.17
USP3-205ENST00000557884 PHC3Q8NDX5 983 aa14□□□□□ -0.17
USP3-205ENST00000557884 ASZ1Q8WWH4 475 aa14□□□□□ -0.17
USP3-205ENST00000557884 ATXN7L3BQ96GX2 97 aa14□□□□□ -0.17
USP3-205ENST00000557884 AHCYL2Q96HN2 611 aaKnown RBP14□□□□□ -0.17
USP3-205ENST00000557884 FERD3LQ96RJ6 166 aa14□□□□□ -0.17
USP3-205ENST00000557884 FMO2Q99518 471 aa14□□□□□ -0.17
USP3-205ENST00000557884 NUDT22Q9BRQ3 303 aa14□□□□□ -0.17
USP3-205ENST00000557884 LDHAL6BQ9BYZ2 381 aaPredicted RBP14□□□□□ -0.17
USP3-205ENST00000557884 RDH14Q9HBH5 336 aa14□□□□□ -0.17
USP3-205ENST00000557884 MOCS1Q9NZB8 636 aa14□□□□□ -0.17
USP3-205ENST00000557884 ZFATQ9P243 1243 aa14□□□□□ -0.17
USP3-205ENST00000557884 ASPMQ8IZT6 3477 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 AKAP13Q12802 2813 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 TCRBV9S1A1TA0A576 114 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 LILRA5A6NI73 299 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 AGRPO00253 132 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 ZW10O43264 779 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 CSO75390 466 aaKnown RBP13.99□□□□□ -0.17
USP3-205ENST00000557884 GPC4O75487 556 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 MPSTP25325 297 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 CSF2RBP32927 897 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 PLOD1Q02809 727 aaPredicted RBP13.99□□□□□ -0.17
USP3-205ENST00000557884 ABRQ12979 859 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 PRKG2Q13237 762 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 CUL1Q13616 776 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 PLCL1Q15111 1095 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 RBM20Q5T481 1227 aaKnown RBP13.99□□□□□ -0.17
USP3-205ENST00000557884 KIAA0408Q6ZU52 694 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 TMPRSS9Q7Z410 1059 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 STRA8Q7Z7C7 330 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 B3GNT8Q7Z7M8 397 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 IFT20Q8IY31 132 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 ZBTB2Q8N680 514 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 SIDT2Q8NBJ9 832 aaKnown RBP13.99□□□□□ -0.17
USP3-205ENST00000557884 OR10G6Q8NH81 332 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 CFAP61Q8NHU2 1237 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 WDR48Q8TAF3 677 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 SKA2Q8WVK7 121 aaPredicted RBP13.99□□□□□ -0.17
USP3-205ENST00000557884 TFGQ92734 400 aaPredicted RBP13.99□□□□□ -0.17
USP3-205ENST00000557884 DEPDC7Q96QD5 511 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 SLC30A3Q99726 388 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 AARSD1Q9BTE6 412 aaKnown RBP13.99□□□□□ -0.17
USP3-205ENST00000557884 HGH1Q9BTY7 390 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 FAM129AQ9BZQ8 928 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 LRRC4CQ9HCJ2 640 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 SMYD2Q9NRG4 433 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 NFU1Q9UMS0 254 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 CDYLQ9Y232 598 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 HEBP2Q9Y5Z4 205 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 PSAT1Q9Y617 370 aa13.99□□□□□ -0.17
USP3-205ENST00000557884 CXorf49A8MYA2 514 aaPredicted RBP13.98□□□□□ -0.17
USP3-205ENST00000557884 DUX1O43812 170 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 TCEA3O75764 348 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 UBXN7O94888 489 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 CPNE6O95741 557 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 PROS1P07225 676 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 HOXB3P14651 431 aaPredicted RBP13.98□□□□□ -0.17
USP3-205ENST00000557884 ACADLP28330 430 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms