RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 VPS35Q96QK1 796 aa10.04□□□□□ -0.8
TRAV33-201ENST00000557514 TMEM121Q9BTD3 319 aa10.04□□□□□ -0.8
TRAV33-201ENST00000557514 GANQ9H2C0 597 aa10.04□□□□□ -0.8
TRAV33-201ENST00000557514 ZWILCHQ9H900 591 aa10.04□□□□□ -0.8
TRAV33-201ENST00000557514 IFT80Q9P2H3 777 aaPredicted RBP10.04□□□□□ -0.8
TRAV33-201ENST00000557514 TNFRSF10DQ9UBN6 386 aa10.04□□□□□ -0.8
TRAV33-201ENST00000557514 SEC14L3Q9UDX4 400 aa10.04□□□□□ -0.8
TRAV33-201ENST00000557514 PCSK1NQ9UHG2 260 aa10.04□□□□□ -0.8
TRAV33-201ENST00000557514 GPN3Q9UHW5 284 aaPredicted RBP10.04□□□□□ -0.8
TRAV33-201ENST00000557514 PSMD13Q9UNM6 376 aa10.04□□□□□ -0.8
TRAV33-201ENST00000557514 RPH3AQ9Y2J0 694 aaPredicted RBP10.04□□□□□ -0.8
TRAV33-201ENST00000557514 ATP6V1DQ9Y5K8 247 aa10.04□□□□□ -0.8
TRAV33-201ENST00000557514 CFAP20Q9Y6A4 193 aaKnown RBP10.04□□□□□ -0.8
TRAV33-201ENST00000557514 MDC1Q14676 2089 aaKnown RBP10.03□□□□□ -0.8
TRAV33-201ENST00000557514 TRAV17A0A0B4J275 112 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 BHMG1C9JSJ3 638 aaPredicted RBP10.03□□□□□ -0.8
TRAV33-201ENST00000557514 H3BRJ5 948 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 SOCS6O14544 535 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 PRPSAP2O60256 369 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 IGFBP2P18065 325 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 POLR2CP19387 275 aaPredicted RBP10.03□□□□□ -0.8
TRAV33-201ENST00000557514 CES1P23141 567 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 PSMA2P25787 234 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 MIPP30301 263 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 DNAJA1P31689 397 aaKnown RBP10.03□□□□□ -0.8
TRAV33-201ENST00000557514 PRRC2AP48634 2157 aaKnown RBP10.03□□□□□ -0.8
TRAV33-201ENST00000557514 TNFSF10P50591 281 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 CASP6P55212 293 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 JAM2P57087 298 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 PPP2R2AP63151 447 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 DCDP81605 110 aaKnown RBP10.03□□□□□ -0.8
TRAV33-201ENST00000557514 RBPJQ06330 500 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 FOXD4Q12950 439 aaPredicted RBP10.03□□□□□ -0.8
TRAV33-201ENST00000557514 SLC9A5Q14940 896 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 PCM1Q15154 2024 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 DPYSL2Q16555 572 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 C3AR1Q16581 482 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 NKAIN1Q4KMZ8 207 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 FAAH2Q6GMR7 532 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 LINC00696Q6ZRV3 163 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 GPR135Q8IZ08 494 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 OR1N1Q8NGS0 311 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 ADAMTS18Q8TE60 1221 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 CSPG4P5Q96PW8 444 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 LMF1Q96S06 567 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 MDFIQ99750 246 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 NDC1Q9BTX1 674 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 AP1M1Q9BXS5 423 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 ZFYVE1Q9HBF4 777 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 RAD18Q9NS91 495 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 TINAGQ9UJW2 476 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 HS3ST3B1Q9Y662 390 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 AP1M2Q9Y6Q5 423 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 SPTBP11277 2137 aa10.03□□□□□ -0.8
TRAV33-201ENST00000557514 ANKRD66B4E2M5 251 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 KLHL18O94889 574 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 PRKCSHP14314 528 aaPredicted RBP10.02□□□□□ -0.81
TRAV33-201ENST00000557514 FOSL1P15407 271 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 AMPD1P23109 780 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 SERPINB6P35237 376 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 SOX5P35711 763 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 CTSCP53634 463 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 IST1P53990 364 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 ARG2P78540 354 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 ITKQ08881 620 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 NIPAL4Q0D2K0 466 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 TMEM115Q12893 351 aaPredicted RBP10.02□□□□□ -0.81
TRAV33-201ENST00000557514 PRKAA1Q13131 559 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 XRCC4Q13426 336 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 GTF2H3Q13889 308 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 NFE2L1Q14494 772 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 KIRREL2Q6UWL6 708 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 POLNQ7Z5Q5 900 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 LRRC49Q8IUZ0 686 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.02□□□□□ -0.81
TRAV33-201ENST00000557514 FKBP10Q96AY3 582 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 INSM2Q96T92 566 aaPredicted RBP10.02□□□□□ -0.81
TRAV33-201ENST00000557514 SLC22A11Q9NSA0 550 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 DHCR7Q9UBM7 475 aaKnown RBP10.02□□□□□ -0.81
TRAV33-201ENST00000557514 AMACRQ9UHK6 382 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 CDC23Q9UJX2 597 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 TTLL3Q9Y4R7 772 aa10.02□□□□□ -0.81
TRAV33-201ENST00000557514 FBN1P35555 2871 aaKnown RBP10.02□□□□□ -0.81
TRAV33-201ENST00000557514 CACNA1CQ13936 2221 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 GSAPA4D1B5 854 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 GOLGA6L4A6NEF3 574 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 ZSCAN9O15535 394 aaPredicted RBP10.01□□□□□ -0.81
TRAV33-201ENST00000557514 POP7O75817 140 aaKnown RBP10.01□□□□□ -0.81
TRAV33-201ENST00000557514 OR2B3O76000 313 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 CRYABP02511 175 aaKnown RBP10.01□□□□□ -0.81
TRAV33-201ENST00000557514 SLC4A1P02730 911 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 ESRRAP11474 423 aaPredicted RBP10.01□□□□□ -0.81
TRAV33-201ENST00000557514 ATP1A3P13637 1013 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 PVRP15151 417 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 PRDX3P30048 256 aaKnown RBP10.01□□□□□ -0.81
TRAV33-201ENST00000557514 SOX11P35716 441 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 ARL4AP40617 200 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 GABRA4P48169 554 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 LTBQ06643 244 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 MAMLD1Q13495 774 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms