RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ANKRD10Q9NXR5 420 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 STK39Q9UEW8 545 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 SEC63Q9UGP8 760 aaKnown RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 SHROOM3Q8TF72 1996 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 KDM3AQ9Y4C1 1321 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 LAMA4Q16363 1823 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 IGF2RP11717 2491 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 EVPLQ92817 2033 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 LOC400499M0QZD8 3231 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 A0A1B0GVM2 712 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 H0Y626 953 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 PRRG1O14668 218 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 KCNJ13O60928 360 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 ECI2O75521 394 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 GAGE7O76087 117 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 TRIM16O95361 564 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 GAGE12FP0CL80 117 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 GAGE12GP0CL81 117 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 GAGE12IP0CL82 117 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 FCGR1AP12314 374 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 KRT10P13645 584 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 GJA1P17302 382 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 PSMC3P17980 439 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 LIFRP42702 1097 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 ART1P52961 327 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 ARSFP54793 590 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 DSCR9P59020 149 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 GAGE1Q13065 139 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 GAGE4Q13068 117 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 SLC12A1Q13621 1099 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 TAF12Q16514 161 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 SLC18A3Q16572 532 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 UBE2SQ16763 222 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 USP41Q3LFD5 358 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 FAM78AQ5JUQ0 283 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 CYP4A22Q5TCH4 519 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 Q6ZSV7 163 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 C18orf65Q6ZTR6 163 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 MARCH9Q86YJ5 346 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 CPXM2Q8N436 756 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 ZNF843Q8N446 348 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 DEFB119Q8N690 84 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 RFWD2Q8NHY2 731 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 ZCCHC10Q8TBK6 192 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 ADAMTS15Q8TE58 950 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 NUDCD2Q8WVJ2 157 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 RAB40AQ8WXH6 277 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 ELSPBP1Q96BH3 223 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 RNFT2Q96EX2 444 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 CAMK1GQ96NX5 476 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 TWNKQ96RR1 684 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 HERC2P3Q9BVR0 1158 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 POLDIP3Q9BY77 421 aaKnown RBP3.87□□□□□ -1.79
CHD8-212ENST00000557329 CTDSP1Q9GZU7 261 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 SLCO5A1Q9H2Y9 848 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 STN1Q9H668 368 aaKnown RBP3.87□□□□□ -1.79
CHD8-212ENST00000557329 PSTPIP2Q9H939 334 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 PTPRHQ9HD43 1115 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.87□□□□□ -1.79
CHD8-212ENST00000557329 PPP1R14DQ9NXH3 145 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 AGO1Q9UL18 857 aaKnown RBP3.87□□□□□ -1.79
CHD8-212ENST00000557329 PCDHGA5Q9Y5G8 931 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 INSL5Q9Y5Q6 135 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 DENND4AQ7Z401 1863 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 NBEAQ8NFP9 2946 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 ZZEF1O43149 2961 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 BPTFQ12830 3046 aa3.87□□□□□ -1.79
CHD8-212ENST00000557329 NAV2Q8IVL1 2488 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 ASXL3Q9C0F0 2248 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 CEP295Q9C0D2 2601 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 CELSR3Q9NYQ7 3312 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 A0A1B0GVT2 93 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 ERICH2A1L162 156 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 BCLAF3A2AJT9 711 aaKnown RBP3.86□□□□□ -1.79
CHD8-212ENST00000557329 GAGE10A6NGK3 116 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 TTC36A6NLP5 189 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 B9A039 149 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 PRSS44E7EML9 344 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 PEX12O00623 359 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 CDX4O14627 284 aaPredicted RBP3.86□□□□□ -1.79
CHD8-212ENST00000557329 MAGEB2O15479 319 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 LDB2O43679 373 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 CLDN7O95471 211 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 ADAP00813 363 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 HNRNPA1P09651 372 aaKnown RBP eCLIP3.86□□□□□ -1.79
CHD8-212ENST00000557329 CKMT1AP12532 417 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 DARSP14868 501 aaKnown RBP3.86□□□□□ -1.79
CHD8-212ENST00000557329 CEBPBP17676 345 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 CTPS1P17812 591 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 CHATP28329 748 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 OR1D2P34982 312 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 SLC26A2P50443 739 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 GPC3P51654 580 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 RAD23BP54727 409 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 GAS1P54826 345 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 ABATP80404 500 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 NCBP1Q09161 790 aaKnown RBP3.86□□□□□ -1.79
CHD8-212ENST00000557329 ZNF324BQ6AW86 544 aaPredicted RBP3.86□□□□□ -1.79
CHD8-212ENST00000557329 FAM122CQ6P4D5 195 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 FUT10Q6P4F1 479 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms