RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ZSWIM1Q9BR11 485 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 WRAP53Q9BUR4 548 aaKnown RBP4.67□□□□□ -1.66
SCFD1-223ENST00000557076 RETREG1Q9H6L5 497 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 ZDHHC6Q9H6R6 413 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 MMRN2Q9H8L6 949 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 MAGEF1Q9HAY2 307 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 FGF22Q9HCT0 170 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 LHX9Q9NQ69 397 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 PARPBPQ9NWS1 579 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 DDIT4Q9NX09 232 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 LUZP4Q9P127 313 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 TAAR2Q9P1P5 351 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 Q9UFV3 132 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 G3BP2Q9UN86 482 aaKnown RBP4.67□□□□□ -1.66
SCFD1-223ENST00000557076 COQ4Q9Y3A0 265 aa4.67□□□□□ -1.66
SCFD1-223ENST00000557076 RTTNQ86VV8 2226 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 MDC1Q14676 2089 aaKnown RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 PRSS38A1L453 326 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 M0QYV0 167 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 TOX3O15405 576 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 CALUO43852 315 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 STX10O60499 249 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 NDUFA10O95299 355 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 ADCY5O95622 1261 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 PEX11BO96011 259 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 ANKRD34CP0C6C1 535 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 TRIM49P0CI25 452 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 TRIM49CP0CI26 452 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 COX6B1P14854 86 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 TBXAS1P24557 533 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 PTPN4P29074 926 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 CASP14P31944 242 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 PSMC2P35998 433 aaKnown RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 GEMIN4P57678 1058 aaKnown RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 NANOS3P60323 173 aaKnown RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 RPS15P62841 145 aaKnown RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 PITX1P78337 314 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 ARF5P84085 180 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 RAD51Q06609 339 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 CDK18Q07002 472 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 FOXM1Q08050 763 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 DNASE1L3Q13609 305 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 POLD3Q15054 466 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 UGP2Q16851 508 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 VWA2Q5GFL6 755 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 FNDC7Q5VTL7 733 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 KANK2Q63ZY3 851 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 PNCKQ6P2M8 343 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 LRRC31Q6UY01 552 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 MED25Q71SY5 747 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 MRGPRGQ86SM5 289 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 SYVN1Q86TM6 617 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 CBARPQ8N350 705 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 D2HGDHQ8N465 521 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 RYBPQ8N488 228 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 ARFGAP1Q8N6T3 406 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 UBR7Q8N806 425 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 GLIS1Q8NBF1 620 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 PLA2G15Q8NCC3 412 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 FDCSPQ8NFU4 85 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 OR7D4Q8NG98 312 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 OR2AP1Q8NGE2 309 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 SPATA3Q8NHX4 192 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 NCSTNQ92542 709 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 SH3KBP1Q96B97 665 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 STAMBPL1Q96FJ0 436 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 FCRL4Q96PJ5 515 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 SLC2A13Q96QE2 648 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 TM6SF2Q9BZW4 377 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 SIK2Q9H0K1 926 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 OR10A5Q9H207 317 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 ACTL8Q9H568 366 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 AGPAT4Q9NRZ5 378 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 SIDT1Q9NXL6 827 aaKnown RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 RCOR3Q9P2K3 495 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 ZNF212Q9UDV6 495 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 USP25Q9UHP3 1055 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 CDC42EP3Q9UKI2 254 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 OSGIN2Q9Y236 505 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 FARSAQ9Y285 508 aaKnown RBP4.66□□□□□ -1.66
SCFD1-223ENST00000557076 COQ6Q9Y2Z9 468 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 ZGRF1Q86YA3 2104 aa4.66□□□□□ -1.66
SCFD1-223ENST00000557076 ARGFXA6NJG6 315 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 CAPN14A8MX76 684 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 ZNF561-AS1K7EIQ3 104 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 ZNF185O15231 689 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 KLRC4O43908 158 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 SPAG6O75602 509 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 RECQL5O94762 991 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-223ENST00000557076 KIAA0754O94854 1291 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 NADKO95544 446 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-223ENST00000557076 PCCBP05166 539 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 PYGMP11217 842 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 FGF5P12034 268 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 KRT15P19012 456 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 XPAP23025 273 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-223ENST00000557076 AK4P27144 223 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-223ENST00000557076 HTR1EP28566 365 aa4.65□□□□□ -1.67
SCFD1-223ENST00000557076 MC4RP32245 332 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms