RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 EPHA6Q9UF33 1036 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 SLC24A2Q9UI40 661 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 RPS6KL1Q9Y6S9 549 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 ZCWPW2A0A1B0GU75 182 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 SLC5A10A0PJK1 596 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 AGRPO00253 132 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 NDUFS3O75489 264 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 USP1O94782 785 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 ANKRD34CP0C6C1 535 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 OGNP20774 298 aaKnown RBP22.3■■□□□ 1.16
TDP1-216ENST00000556867 RPS3P23396 243 aaKnown RBP eCLIP22.3■■□□□ 1.16
TDP1-216ENST00000556867 CSTF2P33240 577 aaKnown RBP eCLIP22.3■■□□□ 1.16
TDP1-216ENST00000556867 ETV5P41161 510 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 GFERP55789 205 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 BOP1Q14137 746 aaKnown RBP22.3■■□□□ 1.16
TDP1-216ENST00000556867 MORF4L2Q15014 288 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 PLCL1Q15111 1095 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 SNAP47Q5SQN1 464 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 RNF187Q5TA31 235 aaPredicted RBP22.3■■□□□ 1.16
TDP1-216ENST00000556867 KLHL35Q6PF15 583 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 SDCCAG8Q86SQ7 713 aaPredicted RBP22.3■■□□□ 1.16
TDP1-216ENST00000556867 C9orf72Q96LT7 481 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 TCF12Q99081 682 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 KRT12Q99456 494 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 TRIM51Q9BSJ1 452 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 GNPTGQ9UJJ9 305 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 MAD1L1Q9Y6D9 718 aa22.3■■□□□ 1.16
TDP1-216ENST00000556867 DSPP15924 2871 aaKnown RBP22.29■■□□□ 1.16
TDP1-216ENST00000556867 GOLGA8KD6RF30 607 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 GOLGA8TH3BQL2 631 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 SMAPO00193 183 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 CAPN5O15484 640 aaPredicted RBP22.29■■□□□ 1.16
TDP1-216ENST00000556867 CCL4P13236 92 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 SYTL3Q4VX76 610 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 NEPROQ6NW34 567 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 ZNF248Q8NDW4 579 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 SPATA4Q8NEY3 305 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 LKAAEAR1Q8TD35 194 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 JPH3Q8WXH2 748 aaPredicted RBP22.29■■□□□ 1.16
TDP1-216ENST00000556867 STAMBPL1Q96FJ0 436 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 B3GNT4Q9C0J1 378 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 MVB12BQ9H7P6 319 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 ACSL6Q9UKU0 697 aa22.29■■□□□ 1.16
TDP1-216ENST00000556867 A8MU76 341 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 PFDN6O15212 129 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 NVLO15381 856 aaKnown RBP22.28■■□□□ 1.16
TDP1-216ENST00000556867 TOX3O15405 576 aaPredicted RBP22.28■■□□□ 1.16
TDP1-216ENST00000556867 FGF3P11487 239 aaPredicted RBP22.28■■□□□ 1.16
TDP1-216ENST00000556867 CCR7P32248 378 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 KRT33BQ14525 404 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 DNAJC21Q5F1R6 531 aaKnown RBP22.28■■□□□ 1.16
TDP1-216ENST00000556867 PTRHD1Q6GMV3 140 aaKnown RBP22.28■■□□□ 1.16
TDP1-216ENST00000556867 HIBCHQ6NVY1 386 aaPredicted RBP22.28■■□□□ 1.16
TDP1-216ENST00000556867 ACVR1CQ8NER5 493 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 LPGAT1Q92604 370 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 TFGQ92734 400 aaPredicted RBP22.28■■□□□ 1.16
TDP1-216ENST00000556867 ZDHHC12Q96GR4 267 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 SNF8Q96H20 258 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 DCBLD2Q96PD2 775 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 TGM7Q96PF1 710 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 KLHL3Q9UH77 587 aa22.28■■□□□ 1.16
TDP1-216ENST00000556867 LAMA5O15230 3695 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 IQCF5A8MTL0 148 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 B4E171 279 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 BHMG1C9JSJ3 638 aaPredicted RBP22.27■■□□□ 1.16
TDP1-216ENST00000556867 RRP8O43159 456 aaKnown RBP22.27■■□□□ 1.16
TDP1-216ENST00000556867 SEC31AO94979 1220 aaKnown RBP22.27■■□□□ 1.16
TDP1-216ENST00000556867 ITGB6P18564 788 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 PGAM1P18669 254 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 ACADLP28330 430 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 SLC5A2P31639 672 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 TSPAN7P41732 249 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 LEPRP48357 1165 aaKnown RBP22.27■■□□□ 1.16
TDP1-216ENST00000556867 MAPK10P53779 464 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 ADARP55265 1226 aaKnown RBP22.27■■□□□ 1.16
TDP1-216ENST00000556867 BRD3Q15059 726 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 NAPRTQ6XQN6 538 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 PRSS42Q7Z5A4 293 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 CILP2Q8IUL8 1156 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 PANX3Q96QZ0 392 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 FERD3LQ96RJ6 166 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 IL1RAPL1Q9NZN1 696 aa22.27■■□□□ 1.16
TDP1-216ENST00000556867 UBA6A0AVT1 1052 aaPredicted RBP22.26■■□□□ 1.15
TDP1-216ENST00000556867 OR5K3A6NET4 321 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 GPC4O75487 556 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 APOA4P06727 396 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 AOAHP28039 575 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 EIF3BP55884 814 aaKnown RBP22.26■■□□□ 1.15
TDP1-216ENST00000556867 DHX9Q08211 1270 aaKnown RBP22.26■■□□□ 1.15
TDP1-216ENST00000556867 LONRF1Q17RB8 773 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 MSS51Q4VC12 460 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 CTSL3PQ5NE16 218 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 ZNF470Q6ECI4 717 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 IRGCQ6NXR0 463 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 CENPUQ71F23 418 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 OOSP2Q86WS3 158 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 LMNTD2Q8IXW0 634 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 SLC22A15Q8IZD6 547 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 KRT222Q8N1A0 295 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 BMPERQ8N8U9 685 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms