RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PPARGP37231 505 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 TMPRSS15P98073 1019 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 MC2RQ01718 297 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CFHR1Q03591 330 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 PRKAA1Q13131 559 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 SEPT6Q14141 434 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 GPR18Q14330 331 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 IL11RAQ14626 422 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 KHDC1Q4VXA5 237 aaKnown RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 ZRANB3Q5FWF4 1079 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 METRNLQ641Q3 311 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 IRGCQ6NXR0 463 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF605Q86T29 641 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 DTX1Q86Y01 620 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 TMEM139Q8IV31 216 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CFAP206Q8IYR0 622 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CACNA2D3Q8IZS8 1091 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 NLGN4XQ8N0W4 816 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 NLGN4YQ8NFZ3 816 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 OR2L2Q8NH16 312 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 MAIP1Q8WWC4 291 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.17□□□□□ -1.262e-9■■■■■ 43.2
SCFD1-222ENST00000556768 C9orf72Q96LT7 481 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 BBC3Q96PG8 261 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CCM2Q9BSQ5 444 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 BRINP2Q9C0B6 783 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 ZFAND3Q9H8U3 227 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 IMP3Q9NV31 184 aaKnown RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 OCIAD1Q9NX40 245 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 TMEM9Q9P0T7 183 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 TMPRSS11EQ9UL52 423 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 PSMD13Q9UNM6 376 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 QSOX1O00391 747 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 EFSO43281 561 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 KLF4O43474 513 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 AP2A1O95782 977 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 GSTM1P09488 218 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 ANKRD34CP0C6C1 535 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 BRAFP15056 766 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 GRNP28799 593 aaKnown RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 MC4RP32245 332 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 FDFT1P37268 417 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CAPZBP47756 277 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 SEPHS1P49903 392 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 RNF144AP50876 292 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CTSCP53634 463 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 GSTM4Q03013 218 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CDH17Q12864 832 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 KLF1Q13351 362 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 NFE2L1Q14494 772 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 SPARCL1Q14515 664 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 PTPRCAPQ14761 206 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 POU6F1Q14863 301 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CLCA4Q14CN2 919 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 RPE65Q16518 533 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CACHD1Q5VU97 1274 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 ANKS6Q68DC2 871 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 PPP1R21Q6ZMI0 780 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 GSTA5Q7RTV2 222 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 C11orf96Q7Z7L8 435 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 RASGRP3Q8IV61 690 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 NXPE1Q8N323 547 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 TRIM58Q8NG06 486 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 SLC35B2Q8TB61 432 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 STYXQ8WUJ0 223 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 NKD1Q969G9 470 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 EAF1Q96JC9 268 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 C12orf66Q96MD2 445 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 PDE7BQ9NP56 450 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 HOMER3Q9NSC5 361 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 EPHA6Q9UF33 1036 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CFAP46Q8IYW2 2715 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 UNC13CQ8NB66 2214 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 hCG_2014768A0A024R1R8 64 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 C17orf113A0A1B0GUU1 675 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 UBA6A0AVT1 1052 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-222ENST00000556768 AP3B1O00203 1094 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 DDX3YO15523 660 aaKnown RBP7.16□□□□□ -1.26
SCFD1-222ENST00000556768 GPR39O43194 453 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 RAD1O60671 282 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 C9P02748 559 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 POLBP06746 335 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 TPH1P17752 444 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 NSG1P42857 185 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 MC1RQ01726 317 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 CACNG1Q06432 222 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 OLIG2Q13516 323 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 BCL7AQ4VC05 210 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 LYPLAL1Q5VWZ2 237 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 KIAA1614Q5VZ46 1190 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 C4orf22Q6V702 233 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 NLRP9Q7RTR0 991 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 VASH2Q86V25 355 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 OOSP2Q86WS3 158 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 RELL1Q8IUW5 271 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 ESX1Q8N693 406 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 OR13C4Q8NGS5 318 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 RTP4Q96DX8 246 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 MED8Q96G25 268 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 LINC00615Q96LM1 132 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms