RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SCNN1BP51168 640 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 KRTAP10-9P60411 292 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 ACY1Q03154 408 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 TUBB3Q13509 450 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 PNOCQ13519 176 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 LLGL1Q15334 1064 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 KYNUQ16719 465 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 CDO1Q16878 200 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 ANO6Q4KMQ2 910 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 C2CD6Q53TS8 623 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 VWA2Q5GFL6 755 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 LCN10Q6JVE6 187 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 RBM43Q6ZSC3 357 aaKnown RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 RFLNAQ6ZTI6 216 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 FAM92BQ6ZTR7 304 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 TTLL10Q6ZVT0 673 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 PYROXD2Q8N2H3 581 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 CCDC185Q8N715 623 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 EMC1Q8N766 993 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 SIDT2Q8NBJ9 832 aaKnown RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 ENOX1Q8TC92 643 aaKnown RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 FAR1Q8WVX9 515 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 ITLN2Q8WWU7 325 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 RXFP2Q8WXD0 754 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 TM9SF4Q92544 642 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 CENPIQ92674 756 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 SCAMP4Q969E2 229 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 NTAN1Q96AB6 310 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 AP2M1Q96CW1 435 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 SCRN2Q96FV2 425 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 CCDC34Q96HJ3 373 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 DHTKD1Q96HY7 919 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 COX14Q96I36 57 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 LRFN5Q96NI6 719 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 GSDMAQ96QA5 445 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 CRACR2AQ9BSW2 395 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 NLNQ9BYT8 704 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 ABCG8Q9H221 673 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 PDCL3Q9H2J4 239 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF552Q9H707 407 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 LRRC19Q9H756 370 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 CATSPERBQ9H7T0 1116 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 ANKRD36A6QL64 1941 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 VPS13CQ709C8 3753 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 PIKFYVEQ9Y2I7 2098 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 SPTBP11277 2137 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 CSPG4Q6UVK1 2322 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 PRRC2AP48634 2157 aaKnown RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 IGHV5-51A0A0C4DH38 117 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 C2CD4BA6NLJ0 364 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 KRTAP9-7A8MTY7 169 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 PSMA7O14818 248 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 FAM155BO75949 473 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 IPO13O94829 963 aaKnown RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 NADKO95544 446 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 GNA14O95837 355 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 VIPP01282 170 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 JCHAINP01591 159 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 ACP5P13686 325 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 TNFAIP3P21580 790 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 SDC4P31431 198 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 PAPOLAP51003 745 aaKnown RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 CLCNKAP51800 687 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 GSDMDP57764 484 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 LINC00310P59036 64 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 BPIFB4P59827 614 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 AP1S1P61966 158 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 APBA1Q02410 837 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 PAK1Q13153 545 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 GPS2Q13227 327 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 ATP1A4Q13733 1029 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 MPP2Q14168 576 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 RFTN1Q14699 578 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 KCNAB1Q14722 419 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 MYBPC3Q14896 1274 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 CLEC16AQ2KHT3 1053 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 PLEKHS1Q5SXH7 462 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 FAM69BQ5VUD6 431 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 TTI2Q6NXR4 508 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 CAVIN1Q6NZI2 390 aaKnown RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 TRIM65Q6PJ69 517 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 STRADAQ7RTN6 431 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 SLFN11Q7Z7L1 901 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 TSPAN33Q86UF1 283 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 NXPE1Q8N323 547 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 ENDOVQ8N8Q3 282 aaKnown RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 ANKS4BQ8N8V4 417 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 SLC38A9Q8NBW4 561 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 EXD1Q8NHP7 514 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 GRHL3Q8TE85 626 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 UBXN4Q92575 508 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 RSC1A1Q92681 617 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF514Q96K75 400 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 AGAP3Q96P47 875 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 AGAP2Q99490 1192 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 CINPQ9BW66 212 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 RAB33BQ9H082 229 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 RMI1Q9H9A7 625 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms