RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 C6orf62Q9GZU0 229 aaPredicted RBP7.66□□□□□ -1.18
CHD8-209ENST00000555935 SLA2Q9H6Q3 261 aa7.66□□□□□ -1.18
CHD8-209ENST00000555935 DCAF13Q9NV06 445 aaKnown RBP7.66□□□□□ -1.18
CHD8-209ENST00000555935 MARCH4Q9P2E8 410 aaPredicted RBP7.66□□□□□ -1.18
CHD8-209ENST00000555935 PNMA8BQ9ULN7 279 aaPredicted RBP7.66□□□□□ -1.18
CHD8-209ENST00000555935 RNF112Q9ULX5 631 aa7.66□□□□□ -1.18
CHD8-209ENST00000555935 NEU3Q9UQ49 428 aa7.66□□□□□ -1.18
CHD8-209ENST00000555935 WBP11Q9Y2W2 641 aaKnown RBP7.66□□□□□ -1.18
CHD8-209ENST00000555935 RALGAPA2Q2PPJ7 1873 aa7.66□□□□□ -1.18
CHD8-209ENST00000555935 A0A1B0GTL3 188 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 FAM25AB3EWG3 89 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 FAM25CB3EWG5 89 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 FAM25GB3EWG6 89 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 CXCR6O00574 342 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 KLK8O60259 260 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 TRAPPC2P0DI81 140 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 TRAPPC2BP0DI82 140 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 ALOX12P18054 663 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 PRKACGP22612 351 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 HOXC13P31276 330 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 GGT5P36269 586 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 CLCNKBP51801 687 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 OR2B6P58173 313 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 TIAL1Q01085 375 aaKnown RBP eCLIP7.65□□□□□ -1.18
CHD8-209ENST00000555935 CYP4F3Q08477 520 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 PCSK7Q16549 785 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 RAB41Q5JT25 222 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 BRMS1LQ5PSV4 323 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 ANKRD34AQ69YU3 496 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 IL31Q6EBC2 164 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 ZNF549Q6P9A3 640 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 KDELC2Q7Z4H8 507 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 GPR149Q86SP6 731 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 DPP9Q86TI2 863 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 LDB1Q86U70 411 aaPredicted RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 PEX13Q92968 403 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 PDLIM5Q96HC4 596 aaKnown RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 SIGLEC11Q96RL6 698 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 CCDC32Q9BV29 185 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 SLC39A8Q9C0K1 460 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 DDX28Q9NUL7 540 aaKnown RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 OSER1Q9NX31 292 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 SATB2Q9UPW6 733 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 CRYL1Q9Y2S2 319 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 NEUROG3Q9Y4Z2 214 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 GMPPBQ9Y5P6 360 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 DICER1Q9UPY3 1922 aaKnown RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 SOCS7O14512 581 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 CD3EAPO15446 510 aaKnown RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 GLP2RO95838 553 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 SERPINF2P08697 491 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 OGNP20774 298 aaKnown RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 GTF2E2P29084 291 aaKnown RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 CTSKP43235 329 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 ARSDP51689 593 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 ARHGDIAP52565 204 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 ACVR1Q04771 509 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 FPGSQ05932 587 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 C19orf57Q0VDD7 668 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 MAD2L1BPQ15013 274 aaPredicted RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 RBBP7Q16576 425 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 TYSND1Q2T9J0 566 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 NOMO2Q5JPE7 1267 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 SIGIRRQ6IA17 410 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 CYP20A1Q6UW02 462 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 GPRIN3Q6ZVF9 776 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 C11orf74Q86VG3 221 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 TSPYL5Q86VY4 417 aaPredicted RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 SETD6Q8TBK2 473 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 SH3RF2Q8TEC5 729 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 RNF34Q969K3 372 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 IMP4Q96G21 291 aaKnown RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 ZBTB18Q99592 522 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 RIBC2Q9H4K1 309 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 ZBTB20Q9HC78 741 aaPredicted RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 FBXL12Q9NXK8 326 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 PCTPQ9UKL6 214 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 TMA7Q9Y2S6 64 aaKnown RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 CAB39Q9Y376 341 aaPredicted RBP7.65□□□□□ -1.18
CHD8-209ENST00000555935 PKP3Q9Y446 797 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 PCDHGB6Q9Y5F9 930 aa7.65□□□□□ -1.18
CHD8-209ENST00000555935 SBF1O95248 1867 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 COL4A5P29400 1685 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 LCHNA4D1U4 455 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 ANKRD28O15084 1053 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 ECI2O75521 394 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 RECQL4O94761 1208 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 PFKLP17858 780 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 AKT1P31749 480 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 MAGEA2P43356 314 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 CLK3P49761 638 aaKnown RBP7.65□□□□□ -1.19
CHD8-209ENST00000555935 RAD51Q06609 339 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 GBX1Q14549 363 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 MFSD10Q14728 455 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 STARD3Q14849 445 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 PON2Q15165 354 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 PROX2Q3B8N5 592 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 CCDC58Q4VC31 144 aa7.65□□□□□ -1.19
CHD8-209ENST00000555935 NBPF12Q5TAG4 269 aaPredicted RBP7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms