RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CD82P27701 267 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 UCNP55089 124 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 RAB15P59190 212 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 FASTKD1Q53R41 847 aaKnown RBP19.99■□□□□ 0.79
VTI1B-205ENST00000555543 LYPLAL1Q5VWZ2 237 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 CERS6Q6ZMG9 384 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 CAND1Q86VP6 1230 aaKnown RBP19.99■□□□□ 0.79
VTI1B-205ENST00000555543 MPP5Q8N3R9 675 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 MFSD3Q96ES6 412 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 RAB33BQ9H082 229 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 CATSPERZQ9NTU4 200 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 CACNA1GO43497 2377 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 OR5K3A6NET4 321 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 AP3B1O00203 1094 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 TOX3O15405 576 aaPredicted RBP19.98■□□□□ 0.79
VTI1B-205ENST00000555543 EFSO43281 561 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 FTH1P02794 183 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 GSTM1P09488 218 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 FNTAP49354 379 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 SH3BP2P78314 561 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 GSTM4Q03013 218 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 RPA4Q13156 261 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 BRD3Q15059 726 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 DCAF12Q5T6F0 453 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 ARHGAP40Q5TG30 622 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 CACHD1Q5VU97 1274 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 VASH2Q86V25 355 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 PHC3Q8NDX5 983 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 LKAAEAR1Q8TD35 194 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 ZFPM2Q8WW38 1151 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 ELMO1Q92556 727 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 ZDHHC12Q96GR4 267 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 CCNL2Q96S94 520 aaPredicted RBP19.98■□□□□ 0.79
VTI1B-205ENST00000555543 TRIM56Q9BRZ2 755 aaKnown RBP19.98■□□□□ 0.79
VTI1B-205ENST00000555543 MRM3Q9HC36 420 aaKnown RBP19.98■□□□□ 0.79
VTI1B-205ENST00000555543 FBXO8Q9NRD0 319 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 SOX13Q9UN79 622 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 HEBP2Q9Y5Z4 205 aa19.98■□□□□ 0.79
VTI1B-205ENST00000555543 GOLGA6L10A0A0M3HER8 536 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 STMND1H3BQB6 276 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 QSOX1O00391 747 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 LIN7AO14910 233 aaPredicted RBP19.97■□□□□ 0.79
VTI1B-205ENST00000555543 CD3EAPO15446 510 aaKnown RBP19.97■□□□□ 0.79
VTI1B-205ENST00000555543 OR56A5P0C7T3 313 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 TCP1P17987 556 aaKnown RBP19.97■□□□□ 0.79
VTI1B-205ENST00000555543 ITGB6P18564 788 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 ARCN1P48444 511 aaKnown RBP19.97■□□□□ 0.79
VTI1B-205ENST00000555543 CD151P48509 253 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 GNG11P61952 73 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 VAC14Q08AM6 782 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 BOP1Q14137 746 aaKnown RBP19.97■□□□□ 0.79
VTI1B-205ENST00000555543 KLHL35Q6PF15 583 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 GPR155Q7Z3F1 870 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 KLHL6Q8WZ60 621 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 BBC3Q96PG8 261 aaPredicted RBP19.97■□□□□ 0.79
VTI1B-205ENST00000555543 FERD3LQ96RJ6 166 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 TTC1Q99614 292 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 ASPSCR1Q9BZE9 553 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 SEMA5BQ9P283 1151 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 COLEC10Q9Y6Z7 277 aa19.97■□□□□ 0.79
VTI1B-205ENST00000555543 IGHV5-51A0A0C4DH38 117 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 SLC5A10A0PJK1 596 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 OR6C74A6NCV1 312 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 IQCF5A8MTL0 148 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 GOLGA8MH3BSY2 632 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 K7ENP7 123 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 IFRD1O00458 451 aaPredicted RBP19.96■□□□□ 0.79
VTI1B-205ENST00000555543 FANCGO15287 622 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 NDUFS1P28331 727 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 KRT33BQ14525 404 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 AARS2Q5JTZ9 985 aaKnown RBP19.96■□□□□ 0.79
VTI1B-205ENST00000555543 INO80CQ6PI98 192 aaPredicted RBP19.96■□□□□ 0.79
VTI1B-205ENST00000555543 OOSP2Q86WS3 158 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 ACVR1CQ8NER5 493 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 TFGQ92734 400 aaPredicted RBP19.96■□□□□ 0.79
VTI1B-205ENST00000555543 RNF31Q96EP0 1072 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 PPM1MQ96MI6 270 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 SERPINB12Q96P63 405 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 MAP3K3Q99759 626 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 HGH1Q9BTY7 390 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 SPRY4Q9C004 299 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 DDX47Q9H0S4 455 aaKnown RBP19.96■□□□□ 0.79
VTI1B-205ENST00000555543 HRASLS2Q9NWW9 162 aa19.96■□□□□ 0.79
VTI1B-205ENST00000555543 BHMG1C9JSJ3 638 aaPredicted RBP19.95■□□□□ 0.78
VTI1B-205ENST00000555543 GOLGA8KD6RF30 607 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 GOLGA8TH3BQL2 631 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 VAPBO95292 243 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 WT1P19544 449 aaPredicted RBP19.95■□□□□ 0.78
VTI1B-205ENST00000555543 ACADLP28330 430 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 CCR7P32248 378 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 CSE1LP55060 971 aaKnown RBP19.95■□□□□ 0.78
VTI1B-205ENST00000555543 SARNPP82979 210 aaKnown RBP19.95■□□□□ 0.78
VTI1B-205ENST00000555543 FOXM1Q08050 763 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 SYTL3Q4VX76 610 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 PAPD7Q5XG87 772 aaKnown RBP19.95■□□□□ 0.78
VTI1B-205ENST00000555543 CEACAM20Q6UY09 585 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 CCDC81Q6ZN84 652 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 AGGF1Q8N302 714 aaeCLIP19.95■□□□□ 0.78
VTI1B-205ENST00000555543 MCUQ8NE86 351 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 OR4E2Q8NGC2 313 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms