RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 LRRC1Q9BTT6 524 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 NRSN2Q9GZP1 204 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 IARS2Q9NSE4 1012 aaKnown RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 C20orf96Q9NUD7 363 aaPredicted RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 KLHL3Q9UH77 587 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 CRYL1Q9Y2S2 319 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 TEX264Q9Y6I9 313 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 AK5Q9Y6K8 562 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 FAM169AQ9Y6X4 670 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 CELSR3Q9NYQ7 3312 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 UNC13CQ8NB66 2214 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 MAGEB16A2A368 324 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 KRT87PA6NCN2 255 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 A8MU76 341 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 KIF1CO43896 1103 aaKnown RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 UBXN7O94888 489 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 FTH1P02794 183 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 TPBGLP0DKB5 382 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 THRAP10827 490 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 CCL4P13236 92 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 OGNP20774 298 aaKnown RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 RPS3P23396 243 aaKnown RBP eCLIP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 ACADLP28330 430 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 GABRB3P28472 473 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 LIMK2P53671 638 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 EPHA4P54764 986 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 PRKG2Q13237 762 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 HIF1AQ16665 826 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 LONRF1Q17RB8 773 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 WHAMMP3Q1A5X7 153 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 HSP90AA5PQ58FG0 334 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 DNAJC21Q5F1R6 531 aaKnown RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 MRNIPQ6NTE8 343 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 TMEM71Q6P5X7 295 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 ZDHHC24Q6UX98 284 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 LMNTD1Q8N9Z9 388 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 KDF1Q8NAX2 398 aaPredicted RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 OR5AR1Q8NGP9 310 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 OR10G6Q8NH81 332 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 SH3KBP1Q96B97 665 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 LIN37Q96GY3 246 aaPredicted RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 AHCYL2Q96HN2 611 aaKnown RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 SLC30A3Q99726 388 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 CARD6Q9BX69 1037 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 STN1Q9H668 368 aaKnown RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 CCDC86Q9H6F5 360 aaKnown RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 UCK1Q9HA47 277 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 ASCL3Q9NQ33 180 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 SLC24A2Q9UI40 661 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 TSR3Q9UJK0 312 aaKnown RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 RUVBL2Q9Y230 463 aaKnown RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 MED16Q9Y2X0 877 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 LOXL2Q9Y4K0 774 aa12.05□□□□□ -0.48
SYNE2-214ENST00000554928 MAP1BP46821 2468 aaKnown RBP12.05□□□□□ -0.48
SYNE2-214ENST00000554928 CCDC187A0A096LP49 1063 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 E7ESA3 106 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 LIN7AO14910 233 aaPredicted RBP12.04□□□□□ -0.48
SYNE2-214ENST00000554928 DUX1O43812 170 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 GPC4O75487 556 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 HAUS5O94927 633 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 PAMP19021 973 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 AOAHP28039 575 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 LSSP48449 732 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 PGGT1BP53609 377 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 EMP3P54852 163 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 ARL4CP56559 192 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 GPLD1P80108 840 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 CKAP4Q07065 602 aaKnown RBP12.04□□□□□ -0.48
SYNE2-214ENST00000554928 HSPA14Q0VDF9 509 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 PDIA2Q13087 525 aaKnown RBP12.04□□□□□ -0.48
SYNE2-214ENST00000554928 THOC5Q13769 683 aaKnown RBP12.04□□□□□ -0.48
SYNE2-214ENST00000554928 ARMC3Q5W041 872 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 STEAP4Q687X5 459 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 PTRHD1Q6GMV3 140 aaKnown RBP12.04□□□□□ -0.48
SYNE2-214ENST00000554928 CNSTQ6PJW8 725 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 RAB11FIP2Q7L804 512 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 MAATS1Q7Z4T9 603 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 SDCCAG8Q86SQ7 713 aaPredicted RBP12.04□□□□□ -0.48
SYNE2-214ENST00000554928 PDZD3Q86UT5 571 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 KCNMB4Q86W47 210 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 PDIK1LQ8N165 341 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 LRRN4CLQ8ND94 238 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 FBXO36Q8NEA4 188 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 OR4D9Q8NGE8 314 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 GIMAP7Q8NHV1 300 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 TFGQ92734 400 aaPredicted RBP12.04□□□□□ -0.48
SYNE2-214ENST00000554928 NXPE2Q96DL1 559 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 RNF31Q96EP0 1072 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 PPM1MQ96MI6 270 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 TMEM74Q96NL1 305 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 TGM7Q96PF1 710 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 FERD3LQ96RJ6 166 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 TTC1Q99614 292 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 HGH1Q9BTY7 390 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.04□□□□□ -0.48
SYNE2-214ENST00000554928 ZMYND15Q9H091 742 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 XKR8Q9H6D3 395 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 KIR3DX1Q9H7L2 352 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms