RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 APC2O95996 2303 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 COL27A1Q8IZC6 1860 aaPredicted RBP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 TAF4O00268 1085 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 PFDN6O15212 129 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 BRINP1O60477 761 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 GPC4O75487 556 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 DXOO77932 396 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 TTC4O95801 387 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 THRAP10827 490 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 ITGB6P18564 788 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 AOAHP28039 575 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 ACADLP28330 430 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 FMO4P31512 558 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 ELK3P41970 407 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 MAPK9P45984 424 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 GABREP78334 506 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 PLOD1Q02809 727 aaPredicted RBP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 EIF3IQ13347 325 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 CTBP1Q13363 440 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 TRA2AQ13595 282 aaKnown RBP eCLIP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 THOC5Q13769 683 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 CRYMQ14894 314 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 C16orf72Q14CZ0 275 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 BRD3Q15059 726 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 HSP90AA5PQ58FG0 334 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 ZNF789Q5FWF6 425 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 C3orf38Q5JPI3 329 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 SPANXN3Q5MJ09 141 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 CTSL3PQ5NE16 218 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 HP1BP3Q5SSJ5 553 aaPredicted RBP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 PHF19Q5T6S3 580 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 ZNF470Q6ECI4 717 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 PTRHD1Q6GMV3 140 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 DUS1LQ6P1R4 473 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 IGF2-ASQ6U949 168 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 RAB11FIP2Q7L804 512 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 PDZD3Q86UT5 571 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 DENND6AQ8IWF6 608 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 LMNTD2Q8IXW0 634 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 LSMEM2Q8N112 164 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 KRT222Q8N1A0 295 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 PHC3Q8NDX5 983 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 ASZ1Q8WWH4 475 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 TFGQ92734 400 aaPredicted RBP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 TMEM159Q96B96 161 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 LRRC39Q96DD0 335 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 CCDC74BQ96LY2 380 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 SLC46A1Q96NT5 459 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 TSSK1BQ9BXA7 367 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 DPH5Q9H2P9 285 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 INTS10Q9NVR2 710 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 GRHL1Q9NZI5 618 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 SLC24A2Q9UI40 661 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 CDYLQ9Y232 598 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 CRYL1Q9Y2S2 319 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 HEBP2Q9Y5Z4 205 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 COLEC10Q9Y6Z7 277 aa12.6□□□□□ -0.39
MTHFD1-209ENST00000554768 UBA6A0AVT1 1052 aaPredicted RBP12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 E7ESA3 106 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 IFRD1O00458 451 aaPredicted RBP12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 NDC80O14777 642 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 PLD2O14939 933 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 HGSO14964 777 aaPredicted RBP12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 C9P02748 559 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 ESR1P03372 595 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 AMD1P17707 334 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 NDUFS1P28331 727 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 EIF3BP55884 814 aaKnown RBP12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 ARL4CP56559 192 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 HSPA14Q0VDF9 509 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 TUBB2AQ13885 445 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 BOP1Q14137 746 aaKnown RBP12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 TRADDQ15628 312 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 SYTL3Q4VX76 610 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 UNC5AQ6ZN44 842 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 ARHGAP22Q7Z5H3 698 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 PROSER1Q86XN7 944 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 PLXDC1Q8IUK5 500 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 VRK3Q8IV63 474 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 SLC22A15Q8IZD6 547 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 FBXO39Q8N4B4 442 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 RCBTB1Q8NDN9 531 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 JPH3Q8WXH2 748 aaPredicted RBP12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 ZCCHC14Q8WYQ9 949 aaKnown RBP12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 RSC1A1Q92681 617 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 FERD3LQ96RJ6 166 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 TUBB2BQ9BVA1 445 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 RAB33BQ9H082 229 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 KIR3DX1Q9H7L2 352 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 ASCL3Q9NQ33 180 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 ZC3H7BQ9UGR2 993 aaKnown RBP12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 GNPTGQ9UJJ9 305 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 VPS9D1Q9Y2B5 631 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 UTP11Q9Y3A2 253 aaKnown RBP12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 MRFAP1Q9Y605 127 aa12.59□□□□□ -0.39
MTHFD1-209ENST00000554768 ITPR1Q14643 2758 aa12.58□□□□□ -0.39
MTHFD1-209ENST00000554768 H3BMM5 538 aa12.58□□□□□ -0.4
MTHFD1-209ENST00000554768 CAPN5O15484 640 aaPredicted RBP12.58□□□□□ -0.4
MTHFD1-209ENST00000554768 HAUS5O94927 633 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms