RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 RAD1O60671 282 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 RASSF9O75901 435 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 ADRA1DP25100 572 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 MSNP26038 577 aaKnown RBP10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 MAP4P27816 1152 aaKnown RBP10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 NSG1P42857 185 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 LEPRP48357 1165 aaKnown RBP10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 LMAN1P49257 510 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 ACVR1Q04771 509 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 RPA4Q13156 261 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 IL11RAQ14626 422 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 PLCL1Q15111 1095 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 DBN1Q16643 649 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 ZNF658BQ4V348 819 aaPredicted RBP10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 TAF1BQ53T94 588 aaPredicted RBP10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 LYPLAL1Q5VWZ2 237 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 CAPRIN2Q6IMN6 1127 aaKnown RBP10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 PPP1R21Q6ZMI0 780 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 NLRP9Q7RTR0 991 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 VASH2Q86V25 355 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 KMT5CQ86Y97 462 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 PIANPQ8IYJ0 282 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 CACNA2D3Q8IZS8 1091 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 NLGN4XQ8N0W4 816 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 IL22RA1Q8N6P7 574 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 NLGN4YQ8NFZ3 816 aaPredicted RBP10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 OR52K1Q8NGK4 314 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 SGSM3Q96HU1 749 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 RMDN2Q96LZ7 410 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 INSM2Q96T92 566 aaPredicted RBP10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 EFHD1Q9BUP0 239 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 TLR10Q9BXR5 811 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 FAM96AQ9H5X1 160 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 CASS4Q9NQ75 786 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 RAB6BQ9NRW1 208 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 HOMER3Q9NSC5 361 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 SLC24A2Q9UI40 661 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 ZNF462Q96JM2 2506 aa10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 TEP1Q99973 2627 aaKnown RBP10.16□□□□□ -0.78
PTCD2P1-201ENST00000554393 ANKRD17O75179 2603 aaKnown RBP10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 OR5K3A6NET4 321 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 GOLGA6L3A6NEY3 463 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 TLCD2A6NGC4 264 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 F8W8V4 182 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 J3QKU1 62 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 AP3B1O00203 1094 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 MATN2O00339 956 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 STK17BO94768 372 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 DLGAP3O95886 979 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 FGGP02679 453 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 FTH1P02794 183 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 APRTP07741 180 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 FGF5P12034 268 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 NELFEP18615 380 aaKnown RBP10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 FOXN2P32314 431 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 CD151P48509 253 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 CDKN1CP49918 316 aaPredicted RBP10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 ABHD18Q0P651 414 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 SNX1Q13596 522 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 TSTD2Q5T7W7 516 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 CACHD1Q5VU97 1274 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 KIAA1614Q5VZ46 1190 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 IRGCQ6NXR0 463 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 ZNF449Q6P9G9 518 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 AFTPHQ6ULP2 937 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 CERS6Q6ZMG9 384 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 TAS2R42Q7RTR8 314 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 BPHLQ86WA6 291 aaPredicted RBP10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 OOSP2Q86WS3 158 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 CFAP206Q8IYR0 622 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 TAB3Q8N5C8 712 aaPredicted RBP10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 OR13J1Q8NGT2 312 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 SLC41A2Q96JW4 573 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 FCRL4Q96PJ5 515 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 TTC1Q99614 292 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 OR52A5Q9H2C5 316 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 COG4Q9H9E3 785 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 APMAPQ9HDC9 416 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 PIH1D1Q9NWS0 290 aaKnown RBP10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 PPP2R2CQ9Y2T4 447 aa10.15□□□□□ -0.78
PTCD2P1-201ENST00000554393 CCDC162PA2VCL2 907 aa10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 IFRD1O00458 451 aaPredicted RBP10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 LIN7AO14910 233 aaPredicted RBP10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 POLBP06746 335 aa10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 LIFP15018 202 aa10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 WT1P19544 449 aaPredicted RBP10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 RPL22P35268 128 aaKnown RBP10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 PPARGP37231 505 aaPredicted RBP10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 SEPHS1P49903 392 aa10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 CDK16Q00536 496 aa10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 PLOD1Q02809 727 aaPredicted RBP10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 KCNC4Q03721 635 aa10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 FOXM1Q08050 763 aa10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 SRSF6Q13247 344 aaKnown RBP10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 CCDC38Q502W7 563 aa10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 DNTTIP2Q5QJE6 756 aaKnown RBP10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 ARMC3Q5W041 872 aa10.14□□□□□ -0.79
PTCD2P1-201ENST00000554393 DUS1LQ6P1R4 473 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms