RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 CHRAC1Q9NRG0 131 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 ANKMY1Q9P2S6 941 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 ZNF711Q9Y462 761 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 PRKAB1Q9Y478 270 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 FAM237BA0A1B0GVD1 139 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 EML2O95834 649 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 ADRA1DP25100 572 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 MAP4P27816 1152 aaKnown RBP13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 NMBRP28336 390 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 CASRP41180 1078 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 TNNT3P45378 269 aaPredicted RBP13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 MAPK9P45984 424 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 FASLGP48023 281 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 ZNF140P52738 457 aaPredicted RBP13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 HHEXQ03014 270 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 CDC20Q12834 499 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 NFATC2Q13469 925 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 SLMAPQ14BN4 828 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 ARMC3Q5W041 872 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 CES3Q6UWW8 571 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 UNC5AQ6ZN44 842 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 CEP128Q6ZU80 1094 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 CHST15Q7LFX5 561 aaPredicted RBP13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 LYSMD3Q7Z3D4 306 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 TMEM135Q86UB9 458 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 SFRP1Q8N474 314 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 MREGQ8N565 214 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 ANKRD7Q92527 254 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 AGAP2Q99490 1192 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 STN1Q9H668 368 aaKnown RBP13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 LRRC4CQ9HCJ2 640 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 TREX1Q9NSU2 369 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 HACD3Q9P035 362 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 SLC2A6Q9UGQ3 507 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 KLHL3Q9UH77 587 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 ZNHIT2Q9UHR6 403 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 ANAPC2Q9UJX6 822 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 ARL5AQ9Y689 179 aa13.77□□□□□ -0.21
SPTLC2-202ENST00000554365 PTPN13Q12923 2485 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 ZCWPW2A0A1B0GU75 182 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 HEATR9A2RTY3 570 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 C1QAP02745 245 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 PGAM1P18669 254 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 PMS2P54278 862 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 FOXK1P85037 733 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 MC2RQ01718 297 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 PTSQ03393 145 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 ACVR1Q04771 509 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 LRP8Q14114 963 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 SEPT6Q14141 434 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 PTPRCAPQ14761 206 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 TAF1AQ15573 450 aaPredicted RBP13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 KYNUQ16719 465 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 DEFB109BQ30KR1 87 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 ANKRD20A4Q4UJ75 823 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 TSTD2Q5T7W7 516 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 C16orf46Q6P387 395 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 CEACAM20Q6UY09 585 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 TIPARPQ7Z3E1 657 aaKnown RBP13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 GLT6D1Q7Z4J2 308 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 PPHLN1Q8NEY8 458 aaKnown RBP13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 OR13J1Q8NGT2 312 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 PYROXD1Q8WU10 500 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 MFSD3Q96ES6 412 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 EFHD1Q9BUP0 239 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 TRABDQ9H4I3 376 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 APMAPQ9HDC9 416 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 PDP2Q9P2J9 529 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 ZC3H7BQ9UGR2 993 aaKnown RBP13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 RIMKLBQ9ULI2 386 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 MAD1L1Q9Y6D9 718 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 COL12A1Q99715 3063 aa13.76□□□□□ -0.21
SPTLC2-202ENST00000554365 MAGEB16A2A368 324 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 CCDC78A2IDD5 438 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 RIPK2O43353 540 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 BUD23O43709 281 aaKnown RBP13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 SNX2O60749 519 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 STK17BO94768 372 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 USP1O94782 785 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 CLDN7O95471 211 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 TTC4O95801 387 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 PYGLP06737 847 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 ZNF30P17039 623 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 ARNTP27540 789 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 OAS2P29728 719 aaKnown RBP13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 SSTR1P30872 391 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 STC1P52823 247 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 CRYMQ14894 314 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 ATP1A1-AS1Q5TC04 95 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 CASC4Q6P4E1 433 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 WDR74Q6RFH5 385 aaPredicted RBP13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 TRMT10CQ7L0Y3 403 aaKnown RBP13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 ZNF765Q7L2R6 523 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 ARHGAP22Q7Z5H3 698 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 OR13C4Q8NGS5 318 aa13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 APOBEC4Q8WW27 367 aaKnown RBP13.75□□□□□ -0.21
SPTLC2-202ENST00000554365 STARD8Q92502 1023 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms