RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 OR52A5Q9H2C5 316 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 THSD1Q9NS62 852 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 C20orf96Q9NUD7 363 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 KLHL3Q9UH77 587 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 SNX24Q9Y343 169 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 SPEGQ15772 3267 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 RAD51CO43502 376 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 APOA4P06727 396 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 RPS3P23396 243 aaKnown RBP eCLIP18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 PDHA2P29803 388 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 CSTF2P33240 577 aaKnown RBP eCLIP18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 MLLT3P42568 568 aaPredicted RBP18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 CAPZBP47756 277 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 CSE1LP55060 971 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 MRPS25P82663 173 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 WHAMMP3Q1A5X7 153 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 PROSER1Q86XN7 944 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 LMNTD2Q8IXW0 634 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 RCBTB1Q8NDN9 531 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 GSDMBQ8TAX9 411 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 ZFPM2Q8WW38 1151 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 FERD3LQ96RJ6 166 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 EBNA1BP2Q99848 306 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 FAM167BQ9BTA0 163 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 DPH5Q9H2P9 285 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 IL1RAPL1Q9NZN1 696 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 TMEM9Q9P0T7 183 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 PISDQ9UG56 409 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 ZMIZ1Q9ULJ6 1067 aa18.04■□□□□ 0.48
PRPF40B-216ENST00000552301 ZFHX4Q86UP3 3567 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 ZCWPW2A0A1B0GU75 182 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 H3BMM5 538 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 KPNA5O15131 536 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 BANF1O75531 89 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 DXOO77932 396 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 TNFSF15O95150 251 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 RPL21P46778 160 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 CFHR1Q03591 330 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 HSPA14Q0VDF9 509 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 CRYMQ14894 314 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 C16orf72Q14CZ0 275 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 TBC1D25Q3MII6 688 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 ZNF658BQ4V348 819 aaPredicted RBP18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 SPANXN3Q5MJ09 141 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 ARMC6Q6NXE6 501 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 IRGCQ6NXR0 463 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 XKR5Q6UX68 686 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 ZNF574Q6ZN55 896 aaPredicted RBP18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 CILP2Q8IUL8 1156 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 KRT222Q8N1A0 295 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 AGGF1Q8N302 714 aaeCLIP18.03■□□□□ 0.485e-8■■■■■ 39.9
PRPF40B-216ENST00000552301 AGBL5Q8NDL9 886 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 ASZ1Q8WWH4 475 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 JPH3Q8WXH2 748 aaPredicted RBP18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 LPGAT1Q92604 370 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 RSC1A1Q92681 617 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 TFGQ92734 400 aaPredicted RBP18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 ZNF578Q96N58 590 aaPredicted RBP18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 TGM7Q96PF1 710 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 ERP44Q9BS26 406 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 RAB17Q9H0T7 212 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 CCDC68Q9H2F9 335 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 KIR3DX1Q9H7L2 352 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 MVB12BQ9H7P6 319 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 INTS10Q9NVR2 710 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 SLC24A2Q9UI40 661 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 CHMP2BQ9UQN3 213 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 UTP11Q9Y3A2 253 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 AKAP13Q12802 2813 aa18.03■□□□□ 0.48
PRPF40B-216ENST00000552301 MN1Q10571 1320 aaPredicted RBP18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 SLC5A10A0PJK1 596 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 IQCF5A8MTL0 148 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 A8MU76 341 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 ESR1P03372 595 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 ITGA2BP08514 1039 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 HGFP14210 728 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 FMO4P31512 558 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 ERVPABLB-1P60509 514 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 MSS51Q4VC12 460 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 IGF2-ASQ6U949 168 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 NAPRTQ6XQN6 538 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 OTOAQ7RTW8 1153 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 ZNF572Q7Z3I7 529 aaPredicted RBP18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 KCNMB4Q86W47 210 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 OOSP2Q86WS3 158 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 ACVR1CQ8NER5 493 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 LKAAEAR1Q8TD35 194 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 FGF11Q92914 225 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 LRRC39Q96DD0 335 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 CFAP36Q96G28 342 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 ZDHHC12Q96GR4 267 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 HGH1Q9BTY7 390 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 P2RY12Q9H244 342 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 ZC3H7BQ9UGR2 993 aaKnown RBP18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 ASF1AQ9Y294 204 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 CRYL1Q9Y2S2 319 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 FAM169AQ9Y6X4 670 aa18.02■□□□□ 0.48
PRPF40B-216ENST00000552301 A0A1W2PNU3 283 aaPredicted RBP18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 PMS2P1A4D2B8 440 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms