RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 hCG_1807616A0A1W2PRN6 198 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 ISM1B1AKI9 464 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 BCAS1O75363 584 aaPredicted RBP8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 GATBO75879 557 aaKnown RBP8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 IFNA6P05013 189 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 CD9P21926 228 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 RFTN2Q52LD8 501 aaPredicted RBP8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 PRAMEF17Q5VTA0 474 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 TMEM236Q5W0B7 351 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 FAM199XQ6PEV8 388 aaPredicted RBP8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 NIPA1Q7RTP0 329 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 HID1Q8IV36 788 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 SETD7Q8WTS6 366 aaKnown RBP8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 CANT1Q8WVQ1 401 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 ZNF607Q96SK3 696 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 TREX2Q9BQ50 279 aaPredicted RBP8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 OCSTAMPQ9BR26 566 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 ATP13A3Q9H7F0 1226 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 TGOLN2O43493 480 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 DNAJB6O75190 326 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 FUCA1P04066 466 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 USP17L8P0C7I0 530 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 UBL4AP11441 157 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 PTBP1P26599 531 aaKnown RBP eCLIP8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 NDST2P52849 883 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 RAB8AP61006 207 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 CXCR4P61073 352 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 TROAPQ12815 778 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 GOLGA7BQ2TAP0 167 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 SGO1Q5FBB7 561 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 MFSD14BQ5SR56 506 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 C16orf86Q6ZW13 317 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 PGBD3Q8N328 593 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 LNX2Q8N448 690 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 NR4A3Q92570 626 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 RAD51AP1Q96B01 352 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 SLC41A3Q96GZ6 507 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 CPB2Q96IY4 423 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 SERAC1Q96JX3 654 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 FERD3LQ96RJ6 166 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 FUZQ9BT04 418 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 SLC38A1Q9H2H9 487 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 SIAEQ9HAT2 523 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 BRD7Q9NPI1 651 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 XPNPEP1Q9NQW7 623 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 POLE4Q9NR33 117 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 ZNF358Q9NW07 568 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 TFCP2L1Q9NZI6 479 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 SIRPGQ9P1W8 387 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 RPS6KB2Q9UBS0 482 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 SIX4Q9UIU6 781 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 PCDHA10Q9Y5I2 948 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 HRH3Q9Y5N1 445 aa8.67□□□□□ -1.02
PPFIA2-220ENST00000550584 DISP2A7MBM2 1401 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 F8W036 122 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 RGS13O14921 159 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 NARSO43776 548 aaKnown RBP8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 TFAP2AP05549 437 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 CSH1P0DML2 217 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 CSH2P0DML3 217 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 CPN2P22792 545 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 HNF1BP35680 557 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 ERVK-25P63136 954 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 BLOC1S1P78537 153 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 PLD1Q13393 1074 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 RAPSNQ13702 412 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 APOFQ13790 326 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 COL13A1Q5TAT6 717 aaPredicted RBP8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 IRF2BP1Q8IU81 584 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 LSMEM2Q8N112 164 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 AZIN2Q96A70 460 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 TMEM80Q96HE8 168 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 C12orf57Q99622 126 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 POLR2J2Q9GZM3 115 aaKnown RBP8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 ZNF639Q9UID6 485 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 SCP2D1Q9UJQ7 156 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 ERVW-1Q9UQF0 538 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 U3KQV3 271 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 CPS1P31327 1500 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 RSL1D1O76021 490 aaKnown RBP8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 SLC22A5O76082 557 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 COX7A2P14406 83 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 CKMT2P17540 419 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 PNPLA4P41247 253 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 DPP6P42658 865 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 ARCN1P48444 511 aaKnown RBP8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 MRPS10P82664 201 aaKnown RBP8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 HSPA14Q0VDF9 509 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 PWP1Q13610 501 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 FAM189A2Q15884 450 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 XKR3Q5GH77 459 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 PAPD4Q6PIY7 484 aaKnown RBP8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 OTOP3Q7RTS5 596 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 ZDHHC21Q8IVQ6 265 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 PTGR2Q8N8N7 351 aaPredicted RBP8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 OR1M1Q8NGA1 313 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 ACOX2Q99424 681 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 SLC39A8Q9C0K1 460 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 RNF32Q9H0A6 362 aa8.66□□□□□ -1.02
PPFIA2-220ENST00000550584 COMMD3Q9UBI1 195 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms