RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 MAP3K3Q99759 626 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 MVB12BQ9H7P6 319 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 FANCEQ9HB96 536 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 LHX9Q9NQ69 397 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 C1GALT1Q9NS00 363 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 FGF21Q9NSA1 209 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 KCND1Q9NSA2 647 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 NLE1Q9NVX2 485 aaPredicted RBP10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 IL17BQ9UHF5 180 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 ANAPC2Q9UJX6 822 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 CROTQ9UKG9 612 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 POLHQ9Y253 713 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 FLNBO75369 2602 aaKnown RBP10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 ZFC3H1O60293 1989 aaKnown RBP10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 TLN1Q9Y490 2541 aaKnown RBP10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 IGLV3-16A0A075B6K0 115 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 IGHV5-51A0A0C4DH38 117 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 TRBV5-4A0A0C4DH59 114 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 OR6C74A6NCV1 312 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 KDM1AO60341 852 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 KATNA1O75449 491 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 CREG1O75629 220 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 KLK3P07288 261 aaPredicted RBP10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 PRKAR1AP10644 381 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 FOLR1P15328 257 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 ZNF28P17035 718 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 PSMA3P25788 255 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 CA5AP35218 305 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 PPARGP37231 505 aaPredicted RBP10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 NSG1P42857 185 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 RPS15P62841 145 aaKnown RBP10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 SPARCL1Q14515 664 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 ITIH4Q14624 930 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 DEFB109BQ30KR1 87 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 SEL1L2Q5TEA6 688 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 NLRP9Q7RTR0 991 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 SERPINA9Q86WD7 417 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 OR4E2Q8NGC2 313 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 SLC35B2Q8TB61 432 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 HES6Q96HZ4 224 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 ELMO2Q96JJ3 720 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 DNAJC1Q96KC8 554 aaKnown RBP10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 LRFN5Q96NI6 719 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 FERD3LQ96RJ6 166 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 FAM118BQ9BPY3 351 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 SRMSQ9H3Y6 488 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 TFB2MQ9H5Q4 396 aaKnown RBP10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 COG4Q9H9E3 785 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 LATS2Q9NRM7 1088 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 BTRCQ9Y297 605 aa10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 CFAP20Q9Y6A4 193 aaKnown RBP10.6□□□□□ -0.71
VTI1BP3-201ENST00000550220 PIPSLA2A3N6 862 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 MROH6A6NGR9 719 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 MKRN2OSH3BPM6 223 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 TERTO14746 1132 aaKnown RBP10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 LIN7AO14910 233 aaPredicted RBP10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 DDX3YO15523 660 aaKnown RBP10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 SGTAO43765 313 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 KRT86O43790 486 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 CPNE3O75131 537 aaKnown RBP10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 METTL18O95568 372 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 FTH1P02794 183 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 MSL3P1P0C860 447 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 OAS2P29728 719 aaKnown RBP10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 FDFT1P37268 417 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 GSDMDP57764 484 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 CDH17Q12864 832 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 OLIG2Q13516 323 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 DNASE1L3Q13609 305 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 PWWP2BQ6NUJ5 590 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 AADACL2Q6P093 401 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 CERS6Q6ZMG9 384 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 TMEM126BQ8IUX1 230 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 DNAAF3Q8N9W5 541 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 THAP4Q8WY91 577 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 CPT1BQ92523 772 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 PEX13Q92968 403 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 RMDN2Q96LZ7 410 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 TMEM121Q9BTD3 319 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 FAM96AQ9H5X1 160 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 SOHLH2Q9NX45 425 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 POLG2Q9UHN1 485 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 SERTAD3Q9UJW9 196 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 RIMKLBQ9ULI2 386 aa10.59□□□□□ -0.71
VTI1BP3-201ENST00000550220 HEATR9A2RTY3 570 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 C2orf74A8MZ97 194 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 E7EVH7 732 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 AP3B1O00203 1094 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 SCRG1O75711 98 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 SUN1O94901 812 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 FTCDO95954 541 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 HBQ1P09105 142 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 OR56A5P0C7T3 313 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 EBLN1P0CF75 366 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 TPH1P17752 444 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 POLR2CP19387 275 aaPredicted RBP10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 CDH3P22223 829 aa10.58□□□□□ -0.72
VTI1BP3-201ENST00000550220 PTPN4P29074 926 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms