RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CDC20Q12834 499 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 CDH17Q12864 832 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 KCNAB2Q13303 367 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 ATP13A5Q4VNC0 1218 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 IRGCQ6NXR0 463 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 C16orf46Q6P387 395 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 FAM151BQ6UXP7 276 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 OR52K1Q8NGK4 314 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 BLOC1S5Q8TDH9 187 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 STARD8Q92502 1023 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 SLC45A3Q96JT2 553 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 C9orf72Q96LT7 481 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 APOL2Q9BQE5 337 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 ZPBPQ9BS86 351 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 ULBP3Q9BZM4 244 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 SLC25A18Q9H1K4 315 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.3
NUP188-211ENST00000550219 FBXO8Q9NRD0 319 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 POT1Q9NUX5 634 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 SIDT1Q9NXL6 827 aaKnown RBP13.15□□□□□ -0.3
NUP188-211ENST00000550219 ZNF624Q9P2J8 865 aaPredicted RBP13.15□□□□□ -0.3
NUP188-211ENST00000550219 IL17BQ9UHF5 180 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 MRPS18BQ9Y676 258 aaKnown RBP13.15□□□□□ -0.3
NUP188-211ENST00000550219 ZNF106Q9H2Y7 1883 aaKnown RBP13.14□□□□□ -0.31
NUP188-211ENST00000550219 CAPN5O15484 640 aaPredicted RBP13.14□□□□□ -0.31
NUP188-211ENST00000550219 ANKRD34CP0C6C1 535 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 ZNF28P17035 718 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 VCLP18206 1134 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 XRCC1P18887 633 aaPredicted RBP13.14□□□□□ -0.31
NUP188-211ENST00000550219 IDSP22304 550 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 SPAM1P38567 509 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 CAPZBP47756 277 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 CARSP49589 748 aaKnown RBP13.14□□□□□ -0.31
NUP188-211ENST00000550219 PLTPP55058 493 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 SH3BP2P78314 561 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 GPR18Q14330 331 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 ERCC6LQ2NKX8 1250 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 ATP1A1-AS1Q5TC04 95 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 ARMC3Q5W041 872 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 PPP1R21Q6ZMI0 780 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 FAM92BQ6ZTR7 304 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 GLT6D1Q7Z4J2 308 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 ZNF547Q8IVP9 402 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 FBXO25Q8TCJ0 367 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 TTC25Q96NG3 672 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 CATSPER2Q96P56 530 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 SERPINB12Q96P63 405 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 VPS35Q96QK1 796 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 OR6C1Q96RD1 312 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 SRPK1Q96SB4 655 aaKnown RBP13.14□□□□□ -0.31
NUP188-211ENST00000550219 PHACTR1Q9C0D0 580 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 ADNPQ9H2P0 1102 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 TMPRSS11EQ9UL52 423 aa13.14□□□□□ -0.31
NUP188-211ENST00000550219 TMEM184BQ9Y519 407 aaPredicted RBP13.14□□□□□ -0.31
NUP188-211ENST00000550219 E7ESA3 106 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 TERTO14746 1132 aaKnown RBP13.13□□□□□ -0.31
NUP188-211ENST00000550219 SUV39H1O43463 412 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 KIF1CO43896 1103 aaKnown RBP13.13□□□□□ -0.31
NUP188-211ENST00000550219 DLGAP3O95886 979 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 C9P02748 559 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 BRAFP15056 766 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 OAS2P29728 719 aaKnown RBP13.13□□□□□ -0.31
NUP188-211ENST00000550219 STAT5AP42229 794 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 HALP42357 657 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 NPY2RP49146 381 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 CSRP3P50461 194 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 ABHD18Q0P651 414 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 TMEM115Q12893 351 aaPredicted RBP13.13□□□□□ -0.31
NUP188-211ENST00000550219 CHRNA6Q15825 494 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 DEFB109BQ30KR1 87 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 FNBP1LQ5T0N5 605 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 CACHD1Q5VU97 1274 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 WDR93Q6P2C0 686 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 RASGRP3Q8IV61 690 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 TTC30BQ8N4P2 665 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 ESX1Q8N693 406 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 GPR150Q8NGU9 434 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 STAMBPL1Q96FJ0 436 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 EFHD1Q9BUP0 239 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 ZCCHC2Q9C0B9 1178 aaKnown RBP13.13□□□□□ -0.31
NUP188-211ENST00000550219 TRABDQ9H4I3 376 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 UCK1Q9HA47 277 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 FAM8A1Q9UBU6 413 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.13□□□□□ -0.31
NUP188-211ENST00000550219 LNPEPQ9UIQ6 1025 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 PSMD13Q9UNM6 376 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 WDR37Q9Y2I8 494 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 RPS6KL1Q9Y6S9 549 aa13.13□□□□□ -0.31
NUP188-211ENST00000550219 V9GYY5 206 aaPredicted RBP13.13□□□□□ -0.31
NUP188-211ENST00000550219 GLYATL1P3A0A0U1RQE8 302 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 OR2AG2A6NM03 316 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 GOLGA8MH3BSY2 632 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 EIF3HO15372 352 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■■□□ 15.9
NUP188-211ENST00000550219 CTIFO43310 598 aaKnown RBP13.12□□□□□ -0.31
NUP188-211ENST00000550219 UGT1A9O60656 530 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 AVILO75366 819 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 KIAA0754O94854 1291 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 UGT1A6P19224 532 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 TCN2P20062 427 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 UGT1A1P22309 533 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms