RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 OR1I1O60431 355 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 TMEM63AO94886 807 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 NMBRP28336 390 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 PREPP48147 710 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 CD151P48509 253 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 TTPAP49638 278 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 MC2RQ01718 297 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 BOP1Q14137 746 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 SEMA3AQ14563 771 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 DCAF12Q5T6F0 453 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 ANKRD22Q5VYY1 191 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 OOSP2Q86WS3 158 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 CPT1BQ92523 772 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 ELMO1Q92556 727 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 PMEPA1Q969W9 287 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 TEFMQ96QE5 360 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 NAPGQ99747 312 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 TSSK1BQ9BXA7 367 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 ZNF768Q9H5H4 540 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 PRORYQ9H606 182 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 SIDT1Q9NXL6 827 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 SAMD15Q9P1V8 674 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 MARCH4Q9P2E8 410 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 SOX13Q9UN79 622 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 NEU2Q9Y3R4 380 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 B3GALT1Q9Y5Z6 326 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 PRSS21Q9Y6M0 314 aa16.81■□□□□ 0.28
CHMP1A-208ENST00000550102 CACNA1GO43497 2377 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 OR5K3A6NET4 321 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 STMND1H3BQB6 276 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 CD3EAPO15446 510 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 MLNP12872 115 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 CXADRP78310 365 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 PPP1R7Q15435 360 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 ANKS6Q68DC2 871 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 CASC4Q6P4E1 433 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 FAM92BQ6ZTR7 304 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 ZFAND4Q86XD8 727 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 OTUD6BQ8N6M0 293 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 MCUQ8NE86 351 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 ACVR1CQ8NER5 493 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 CD180Q99467 661 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 MVB12BQ9H7P6 319 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 WDR70Q9NW82 654 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 RALYQ9UKM9 306 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 SSUH2Q9Y2M2 353 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 PCDHB11Q9Y5F2 797 aa16.8■□□□□ 0.28
CHMP1A-208ENST00000550102 LOC400499M0QZD8 3231 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 TLCD2A6NGC4 264 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 KIF1CO43896 1103 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 PDHA2P29803 388 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 SEPHS1P49903 392 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 PPP1CAP62136 330 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 PLOD1Q02809 727 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 DNTTIP2Q5QJE6 756 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 CACHD1Q5VU97 1274 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 PAPD7Q5XG87 772 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 KIAA0930Q6ICG6 404 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 ARMC6Q6NXE6 501 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 CEACAM20Q6UY09 585 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 CAND1Q86VP6 1230 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 UBXN4Q92575 508 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 MFSD3Q96ES6 412 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 FERD3LQ96RJ6 166 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 CCNL2Q96S94 520 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 ZPBPQ9BS86 351 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 HGH1Q9BTY7 390 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 DDX47Q9H0S4 455 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 CPNE5Q9HCH3 593 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 FBXO8Q9NRD0 319 aa16.79■□□□□ 0.28
CHMP1A-208ENST00000550102 CTAGE9A4FU28 777 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 OR6C74A6NCV1 312 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 GOLGA8MH3BSY2 632 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 PRMT5O14744 637 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 AVILO75366 819 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 VAPBO95292 243 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 PAMP19021 973 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 ARNTP27540 789 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 ATP1A2P50993 1020 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 VAC14Q08AM6 782 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 BRD3Q15059 726 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 TMED2Q15363 201 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 TGIF1Q15583 401 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 RNF187Q5TA31 235 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 MRNIPQ6NTE8 343 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 CES3Q6UWW8 571 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 GPR155Q7Z3F1 870 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 LDB1Q86U70 411 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 LRRC6Q86X45 466 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 DTX1Q86Y01 620 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 PPIL6Q8IXY8 311 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 LCN9Q8WX39 176 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 KLHL6Q8WZ60 621 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 TFGQ92734 400 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 SLCO2A1Q92959 643 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 CAPZA3Q96KX2 299 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 SERPINB12Q96P63 405 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 HRASLS2Q9NWW9 162 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 ASIC3Q9UHC3 531 aa16.78■□□□□ 0.28
CHMP1A-208ENST00000550102 GNPTGQ9UJJ9 305 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms