RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 PRKG2Q13237 762 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 TUBB3Q13509 450 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 ERV3-1Q14264 604 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 GSE1Q14687 1217 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 SIX1Q15475 284 aaPredicted RBP15.5■□□□□ 0.07
COX6A1-203ENST00000550009 BORAQ6PGQ7 559 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 RBM12BQ8IXT5 1001 aaKnown RBP15.5■□□□□ 0.07
COX6A1-203ENST00000550009 SIDT2Q8NBJ9 832 aaKnown RBP15.5■□□□□ 0.07
COX6A1-203ENST00000550009 SLC38A9Q8NBW4 561 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 CT55Q8WUE5 264 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 DCUN1D1Q96GG9 259 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 CALR3Q96L12 384 aaKnown RBP15.5■□□□□ 0.07
COX6A1-203ENST00000550009 COPS8Q99627 209 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 ZPBPQ9BS86 351 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 RAB33BQ9H082 229 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 KIR3DX1Q9H7L2 352 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 ZNF71Q9NQZ8 489 aaPredicted RBP15.5■□□□□ 0.07
COX6A1-203ENST00000550009 GEMIN8Q9NWZ8 242 aaKnown RBP15.5■□□□□ 0.07
COX6A1-203ENST00000550009 ZDHHC3Q9NYG2 299 aa15.5■□□□□ 0.07
COX6A1-203ENST00000550009 MROH6A6NGR9 719 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 MIF4GDA9UHW6 222 aaKnown RBP15.49■□□□□ 0.07
COX6A1-203ENST00000550009 BTN3A1O00481 513 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 TOX3O15405 576 aaPredicted RBP15.49■□□□□ 0.07
COX6A1-203ENST00000550009 OR1I1O60431 355 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 KATNA1O75449 491 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 SLC35G4P0C7Q5 338 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 TPBGLP0DKB5 382 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 PVRP15151 417 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 FOXN2P32314 431 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 CETN2P41208 172 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 KCNAB2Q13303 367 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 SEMA3AQ14563 771 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 SKIDA1Q1XH10 827 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 DNTTIP2Q5QJE6 756 aaKnown RBP15.49■□□□□ 0.07
COX6A1-203ENST00000550009 SPNS2Q8IVW8 549 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 SYCE1Q8N0S2 351 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 OR13J1Q8NGT2 312 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 HM13Q8TCT9 377 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 FERD3LQ96RJ6 166 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 FERMT1Q9BQL6 677 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 CCM2Q9BSQ5 444 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 TLR10Q9BXR5 811 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 LRRC40Q9H9A6 602 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 IMPACTQ9P2X3 320 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 ACSL5Q9ULC5 683 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 UBR5O95071 2799 aaPredicted RBP15.49■□□□□ 0.07
COX6A1-203ENST00000550009 NBASA2RRP1 2371 aa15.49■□□□□ 0.07
COX6A1-203ENST00000550009 GOLGA6L9A6NEM1 432 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 SLC9B1P1A6NJY1 282 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 CYSRT1A8MQ03 144 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 H7C0S8 307 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 SUV39H1O43463 412 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 HCRTR1O43613 425 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 IFNB1P01574 187 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 CTSBP07858 339 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 ABRQ12979 859 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 IL11RAQ14626 422 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 LDB1Q86U70 411 aaPredicted RBP15.48■□□□□ 0.07
COX6A1-203ENST00000550009 TRIM73Q86UV7 250 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 PPP1R3BQ86XI6 285 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 SLC13A5Q86YT5 568 aaPredicted RBP15.48■□□□□ 0.07
COX6A1-203ENST00000550009 ESX1Q8N693 406 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 TTC13Q8NBP0 860 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 LKAAEAR1Q8TD35 194 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 STYXQ8WUJ0 223 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 KIAA1143Q96AT1 154 aaPredicted RBP15.48■□□□□ 0.07
COX6A1-203ENST00000550009 ULK4Q96C45 1275 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 STAMBPL1Q96FJ0 436 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 ZNF514Q96K75 400 aaPredicted RBP15.48■□□□□ 0.07
COX6A1-203ENST00000550009 HGH1Q9BTY7 390 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 FAM117AQ9C073 453 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 SLC25A18Q9H1K4 315 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 FGF21Q9NSA1 209 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 SMARCAL1Q9NZC9 954 aa15.48■□□□□ 0.07
COX6A1-203ENST00000550009 FLNBO75369 2602 aaKnown RBP15.47■□□□□ 0.07
COX6A1-203ENST00000550009 UBA6A0AVT1 1052 aaPredicted RBP15.47■□□□□ 0.07
COX6A1-203ENST00000550009 TLCD2A6NGC4 264 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 ST6GAL1P15907 406 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 TCN2P20062 427 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 MSNP26038 577 aaKnown RBP15.47■□□□□ 0.07
COX6A1-203ENST00000550009 HADHAP40939 763 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 CSE1LP55060 971 aaKnown RBP15.47■□□□□ 0.07
COX6A1-203ENST00000550009 CRADDP78560 199 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 GPS2Q13227 327 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 MAP7Q14244 749 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 OOSP2Q86WS3 158 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 TMEM151BQ8IW70 566 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 FAM20CQ8IXL6 584 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 D2HGDHQ8N465 521 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 OR52E1Q8NGJ3 308 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 OR5AR1Q8NGP9 310 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 UBXN4Q92575 508 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 HDAC10Q969S8 669 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 ZNF501Q96CX3 271 aaPredicted RBP15.47■□□□□ 0.07
COX6A1-203ENST00000550009 LHX9Q9NQ69 397 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 CIDEBQ9UHD4 219 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 RARRES3Q9UL19 164 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 PLAGL1Q9UM63 463 aa15.47■□□□□ 0.07
COX6A1-203ENST00000550009 GSAPA4D1B5 854 aa15.46■□□□□ 0.07
COX6A1-203ENST00000550009 GOLGA6L3A6NEY3 463 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms