RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 CYB5D1Q6P9G0 228 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 PIANPQ8IYJ0 282 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 CLDN19Q8N6F1 224 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 OR52K1Q8NGK4 314 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 ZFPM2Q8WW38 1151 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 CD180Q99467 661 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 VPS37BQ9H9H4 285 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 GEMIN8Q9NWZ8 242 aaKnown RBP15.92■□□□□ 0.14
VPS29-207ENST00000549970 HEBP2Q9Y5Z4 205 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 TLN1Q9Y490 2541 aaKnown RBP15.91■□□□□ 0.14
VPS29-207ENST00000549970 C17orf113A0A1B0GUU1 675 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 LIASO43766 372 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 KRT86O43790 486 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 POLR2CP19387 275 aaPredicted RBP15.91■□□□□ 0.14
VPS29-207ENST00000549970 TCN2P20062 427 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 MSNP26038 577 aaKnown RBP15.91■□□□□ 0.14
VPS29-207ENST00000549970 OAS2P29728 719 aaKnown RBP15.91■□□□□ 0.14
VPS29-207ENST00000549970 CCR10P46092 362 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 LMAN1P49257 510 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 KPNA2P52292 529 aaKnown RBP15.91■□□□□ 0.14
VPS29-207ENST00000549970 MC1RQ01726 317 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 ACY1Q03154 408 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 CACNG1Q06432 222 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 OASLQ15646 514 aaKnown RBP15.91■□□□□ 0.14
VPS29-207ENST00000549970 DBN1Q16643 649 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 LINC00523Q86TU6 105 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 SLC13A5Q86YT5 568 aaPredicted RBP15.91■□□□□ 0.14
VPS29-207ENST00000549970 DNAAF3Q8N9W5 541 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 OR4E2Q8NGC2 313 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 C1orf54Q8WWF1 131 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 PPM1MQ96MI6 270 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 FERD3LQ96RJ6 166 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 SLC25A18Q9H1K4 315 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 ETNK1Q9HBU6 452 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 SMARCAL1Q9NZC9 954 aa15.91■□□□□ 0.14
VPS29-207ENST00000549970 GOLGA6L3A6NEY3 463 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 MROH6A6NGR9 719 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 OR51F1A6NGY5 319 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 IFRD1O00458 451 aaPredicted RBP15.9■□□□□ 0.14
VPS29-207ENST00000549970 KATNA1O75449 491 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 CCNYL3P0C7X3 344 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 PDHA2P29803 388 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 STIP1P31948 543 aaKnown RBP15.9■□□□□ 0.14
VPS29-207ENST00000549970 PREPP48147 710 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 HSD11B2P80365 405 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 CDH17Q12864 832 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 PRKAA1Q13131 559 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 KCNAB2Q13303 367 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 SNX1Q13596 522 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 SKIDA1Q1XH10 827 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 DEFB109BQ30KR1 87 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 PWWP2BQ6NUJ5 590 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 FBXO38Q6PIJ6 1188 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 PRUNE1Q86TP1 453 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 KMT5CQ86Y97 462 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 D2HGDHQ8N465 521 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 ACVR1CQ8NER5 493 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 OR52A5Q9H2C5 316 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 ADNPQ9H2P0 1102 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 FGF21Q9NSA1 209 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 SOHLH2Q9NX45 425 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 ZNF148Q9UQR1 794 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 PRSS21Q9Y6M0 314 aa15.9■□□□□ 0.14
VPS29-207ENST00000549970 ERI2A8K979 691 aaKnown RBP15.89■□□□□ 0.13
VPS29-207ENST00000549970 E7EVH7 732 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 ZBTB11O95625 1053 aaPredicted RBP15.89■□□□□ 0.13
VPS29-207ENST00000549970 GAS8O95995 478 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 MT-ND3P03897 115 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 NTRK1P04629 796 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 ETS1P14921 441 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 CDH3P22223 829 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 FDFT1P37268 417 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 GSDMDP57764 484 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 ZNF658BQ4V348 819 aaPredicted RBP15.89■□□□□ 0.13
VPS29-207ENST00000549970 ZNF449Q6P9G9 518 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 PPP1R21Q6ZMI0 780 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 PHC3Q8NDX5 983 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 LCN9Q8WX39 176 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 NRTNQ99748 197 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 FRMD8P1Q9BZ68 369 aaPredicted RBP15.89■□□□□ 0.13
VPS29-207ENST00000549970 TRIM4Q9C037 500 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 SRMSQ9H3Y6 488 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 LHX9Q9NQ69 397 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 PADI1Q9ULC6 663 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 PCDHB3Q9Y5E6 796 aa15.89■□□□□ 0.13
VPS29-207ENST00000549970 CCDC162PA2VCL2 907 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 GSAPA4D1B5 854 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 AP2A2O94973 939 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 FOXN2P32314 431 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 GRIA1P42261 906 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 NSG1P42857 185 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 CD151P48509 253 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 TUBB4BP68371 445 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 TUBB2AQ13885 445 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 ERV3-1Q14264 604 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 ITIH4Q14624 930 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 BRD3Q15059 726 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 RPS6KA1Q15418 735 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 GPR19Q15760 415 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 TMTC4Q5T4D3 741 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms