RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SIAH2O43255 324 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 KRT38O76015 456 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 RPS4Y1P22090 263 aaKnown RBP4.79□□□□□ -1.64
SCAF11-212ENST00000549162 SERPINA4P29622 427 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 ADH7P40394 386 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 RAB10P61026 200 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 SIGLEC14Q08ET2 396 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 ADGRE1Q14246 886 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 ARSJQ5FYB0 599 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-212ENST00000549162 RAP1GAP2Q684P5 730 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 FAM180BQ6P0A1 224 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 USP45Q70EL2 814 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PDZD3Q86UT5 571 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF227Q86WZ6 799 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 SULF2Q8IWU5 870 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 LSMEM2Q8N112 164 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 MFSD2AQ8NA29 543 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 GLB1L3Q8NCI6 653 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-212ENST00000549162 OR4K2Q8NGD2 314 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CEP76Q8TAP6 659 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 FGF13Q92913 245 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PPP1R14AQ96A00 147 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 MVB12AQ96EY5 273 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 OMDQ99983 421 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 LBHD1Q9BQE6 289 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CCDC77Q9BR77 488 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 GRIP2Q9C0E4 1043 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 FAM107BQ9H098 131 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 GSTO2Q9H4Y5 243 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 GPAMQ9HCL2 828 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 ELOVL2Q9NXB9 296 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PKD2L2Q9NZM6 624 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 REV1Q9UBZ9 1251 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 XPO7Q9UIA9 1087 aaKnown RBP4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PCDHGA9Q9Y5G4 932 aaKnown RBP4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PCDHGA8Q9Y5G5 932 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PCDHGA7Q9Y5G6 932 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PCDHGA6Q9Y5G7 932 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PCDHGA3Q9Y5H0 932 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 GPC6Q9Y625 555 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-212ENST00000549162 TCRBV16S1A1N1A0A5B0 115 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 F8W810 466 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 GOLGA8MH3BSY2 632 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 J3KRW8 73 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 NTN3O00634 580 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-212ENST00000549162 NDUFAB1O14561 156 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PROM1O43490 865 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 ASNA1O43681 348 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 TMEM127O75204 238 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CCNDBP1O95273 360 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 EPHX1P07099 455 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CD82P27701 267 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 SCNN1BP51168 640 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 MAPK10P53779 464 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 WNT3AP56704 352 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 C2orf54Q08AI8 447 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 NFATC2Q13469 925 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 TDGQ13569 410 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 KRT81Q14533 505 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 TTLL9Q3SXZ7 439 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 TCEAL5Q5H9L2 206 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 ABHD17CQ6PCB6 329 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 ZCCHC12Q6PEW1 402 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 LIPIQ6XZB0 460 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 GPALPP1Q8IXQ4 340 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 KRT222Q8N1A0 295 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 AADATQ8N5Z0 425 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PIWIL2Q8TC59 973 aaKnown RBP4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CCT6BQ92526 530 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CDKN2AIPNLQ96HQ2 116 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CCDC106Q9BWC9 280 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 BTBD1Q9H0C5 482 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 SP110Q9HB58 689 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 GULP1Q9UBP9 304 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 A0A1W2PRQ8 180 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 SLC22A31A6NKX4 558 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 HCRTO43612 131 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PEX1O43933 1283 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 KLHL18O94889 574 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PRAMEF12O95522 483 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 RHOCP08134 193 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CD63P08962 238 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 EPORP19235 508 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 NME2P22392 152 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 AMPD1P23109 780 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CFPP27918 469 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 GPR15P49685 360 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 RAB6CQ53S08 254 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 TJAP1Q5JTD0 557 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 LIPMQ5VYY2 423 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 KIAA0895LQ68EN5 471 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 Q6ZVU0 165 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 PIWIL3Q7Z3Z3 882 aaKnown RBP4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CMIPQ8IY22 773 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 TBC1D21Q8IYX1 336 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 CAMKVQ8NCB2 501 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 FAM110BQ8TC76 370 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF675Q8TD23 568 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 DNAJC9Q8WXX5 260 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 ROPN1LQ96C74 230 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms