RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 POLBP06746 335 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 RALBP11234 206 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 MC4RP32245 332 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 HADHAP40939 763 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 ARCN1P48444 511 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 ARL4DP49703 201 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 VAV2P52735 878 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 PMS2P54278 862 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 NAP1L1P55209 391 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 TUBB4BP68371 445 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 LAMB3Q13751 1172 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 TUBB2AQ13885 445 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 GPR19Q15760 415 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 FBXO38Q6PIJ6 1188 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 BPHLQ86WA6 291 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 ZNF501Q96CX3 271 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 TUBB2BQ9BVA1 445 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 TWSG1Q9GZX9 223 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 POMT2Q9UKY4 750 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 CYSRT1A8MQ03 144 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 CFAP99D6REC4 459 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 K7EM74 188 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 CPNE3O75131 537 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 ZNF189O75820 626 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 RECKO95980 971 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 NTRK1P04629 796 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 ATP1B2P14415 290 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 NR1D1P20393 614 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 NDUFS1P28331 727 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 CDKN1CP49918 316 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 FOXK1P85037 733 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 ARMC6Q6NXE6 501 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 CFAP206Q8IYR0 622 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 HEXDCQ8WVB3 486 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 CCM2Q9BSQ5 444 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 OR52A5Q9H2C5 316 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 COG4Q9H9E3 785 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 LATS2Q9NRM7 1088 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 SOHLH2Q9NX45 425 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 ZDHHC3Q9NYG2 299 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 COLEC10Q9Y6Z7 277 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 FER1L5A0AVI2 2057 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 TNRC6AQ8NDV7 1962 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 RELNP78509 3460 aa16.93■□□□□ 0.3
CHMP1A-205ENST00000548650 NAV2Q8IVL1 2488 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 C17orf113A0A1B0GUU1 675 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 H7C0S8 307 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 RFPL1O75677 317 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 SCRG1O75711 98 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 METTL18O95568 372 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 PRSS56P0CW18 603 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 POLR2CP19387 275 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 ACRV1P26436 265 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 CETN2P41208 172 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 RPS18P62269 152 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 GPS2Q13227 327 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 KLF1Q13351 362 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 GSE1Q14687 1217 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 GPR33Q49SQ1 333 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 FAM199XQ6PEV8 388 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 ZNF517Q6ZMY9 492 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 ARHGEF18Q6ZSZ5 1173 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 TMEM126BQ8IUX1 230 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 FAM71DQ8N9W8 422 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 ACVR1CQ8NER5 493 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 OR8K5Q8NH50 307 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 PACSIN2Q9UNF0 486 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 MAN2B2Q9Y2E5 1009 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 HEBP2Q9Y5Z4 205 aa16.92■□□□□ 0.3
CHMP1A-205ENST00000548650 SNRNP200O75643 2136 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 MED13Q9UHV7 2174 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 PIPSLA2A3N6 862 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 MKRN2OSH3BPM6 223 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 MATN2O00339 956 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 PTPN4P29074 926 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 GDF10P55107 478 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 ABRQ12979 859 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 IL10RAQ13651 578 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 UGT8Q16880 541 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 PARP6Q2NL67 630 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 COLEC12Q5KU26 742 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 TCTN3Q6NUS6 607 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 SERPINA9Q86WD7 417 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 TMEM139Q8IV31 216 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 SLC38A9Q8NBW4 561 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 OR4E2Q8NGC2 313 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 LRRC45Q96CN5 670 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 NRTNQ99748 197 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 TLR10Q9BXR5 811 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 GPR87Q9BY21 358 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 PITPNM3Q9BZ71 974 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 LRRC40Q9H9A6 602 aa16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 NLE1Q9NVX2 485 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 R3HDM2Q9Y2K5 976 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-205ENST00000548650 A0A0U1RQJ8 604 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 SLC9B1P1A6NJY1 282 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 BTN3A1O00481 513 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 DDX3YO15523 660 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 DNAJB5O75953 348 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 PDHA2P29803 388 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms