RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 IRF9Q00978 393 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 CCDC91Q7Z6B0 441 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 BTN2A2Q8WVV5 523 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 CKAP2Q8WWK9 683 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 CCDC97Q96F63 343 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-227ENST00000548080 TSNARE1Q96NA8 513 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 BIRC8Q96P09 236 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 P2RY12Q9H244 342 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 SLC32A1Q9H598 525 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 ATXN10Q9UBB4 475 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 SLC17A4Q9Y2C5 497 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 GPSM3Q9Y4H4 160 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 PRMT5O14744 637 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-227ENST00000548080 TNFRSF10CO14798 259 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 TOP3BO95985 862 aaKnown RBP17.08■□□□□ 0.32
HDAC7-227ENST00000548080 ESR1P03372 595 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 CSRP1P21291 193 aaKnown RBP17.08■□□□□ 0.32
HDAC7-227ENST00000548080 RPS3P23396 243 aaKnown RBP eCLIP17.08■□□□□ 0.32
HDAC7-227ENST00000548080 AK4P27144 223 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-227ENST00000548080 LSP1P33241 339 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 GMPRP36959 345 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 ETV4P43268 484 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 PGGT1BP53609 377 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 ITIH4Q14624 930 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 TRIP6Q15654 476 aaKnown RBP17.08■□□□□ 0.32
HDAC7-227ENST00000548080 N4BP2L1Q5TBK1 243 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-227ENST00000548080 DGLUCYQ7Z3D6 616 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 ADGRG6Q86SQ4 1221 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 PHYKPLQ8IUZ5 450 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 SFTPA2Q8IWL1 248 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 PLD6Q8N2A8 252 aaKnown RBP17.08■□□□□ 0.32
HDAC7-227ENST00000548080 BAHD1Q8TBE0 780 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-227ENST00000548080 CNDP2Q96KP4 475 aaKnown RBP17.08■□□□□ 0.32
HDAC7-227ENST00000548080 CCDC134Q9H6E4 229 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 POPDC3Q9HBV1 291 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 ZDHHC3Q9NYG2 299 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 SIRPGQ9P1W8 387 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 FTSJ1Q9UET6 329 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 ZNHIT2Q9UHR6 403 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 PCDHB1Q9Y5F3 818 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 ST14Q9Y5Y6 855 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 DGKBQ9Y6T7 804 aa17.08■□□□□ 0.32
HDAC7-227ENST00000548080 YY2O15391 372 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 DHRS4L1P0CG22 281 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 ZNF8P17098 575 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-227ENST00000548080 CD9P21926 228 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 BLKP51451 505 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 SIM1P81133 766 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-227ENST00000548080 TIAL1Q01085 375 aaKnown RBP eCLIP17.07■□□□□ 0.32
HDAC7-227ENST00000548080 GABPB1Q06547 395 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-227ENST00000548080 ZNF460Q14592 562 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 INAVAQ3KP66 663 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 PLA2G4EQ3MJ16 856 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 CTSL3PQ5NE16 218 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 C16orf46Q6P387 395 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 CRTC3Q6UUV7 619 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 TAF8Q7Z7C8 310 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 TBC1D1Q86TI0 1168 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-227ENST00000548080 ARMC2Q8NEN0 867 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 OR4C6Q8NH72 309 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 GPAMQ9HCL2 828 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 ZNF358Q9NW07 568 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 SMOXQ9NWM0 555 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 TAS2R13Q9NYV9 303 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 TMEM216Q9P0N5 145 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 EMCNQ9ULC0 261 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 DOLKQ9UPQ8 538 aa17.07■□□□□ 0.32
HDAC7-227ENST00000548080 RUVBL2Q9Y230 463 aaKnown RBP17.07■□□□□ 0.32
HDAC7-227ENST00000548080 ARHGEF17Q96PE2 2063 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-227ENST00000548080 ZFC3H1O60293 1989 aaKnown RBP17.06■□□□□ 0.32
HDAC7-227ENST00000548080 SRRM3A6NNA2 597 aaPredicted RBP17.06■□□□□ 0.32
HDAC7-227ENST00000548080 PLIN3O60664 434 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 DNAJC6O75061 913 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 VPS26AO75436 327 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 KLHL2O95198 593 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 LDOC1O95751 146 aaPredicted RBP17.06■□□□□ 0.32
HDAC7-227ENST00000548080 ANXA6P08133 673 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 SLC26A3P40879 764 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 CCDC153Q494R4 210 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 NRROSQ86YC3 692 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 CENPLQ8N0S6 344 aaPredicted RBP17.06■□□□□ 0.32
HDAC7-227ENST00000548080 KCTD4Q8WVF5 259 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 MAGEB18Q96M61 343 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 OR2M4Q96R27 311 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 COPS8Q99627 209 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 BOCQ9BWV1 1114 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 GNPTGQ9UJJ9 305 aa17.06■□□□□ 0.32
HDAC7-227ENST00000548080 IGLV3-16A0A075B6K0 115 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 LMO7DNF2Z398 122 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 H3BMM5 538 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 WISP3O95389 354 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-227ENST00000548080 PROCP04070 461 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 CEACAM1P13688 526 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 NSG1P42857 185 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 SERPINB4P48594 390 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 CTBSQ01459 385 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 PDAP1Q13442 181 aaKnown RBP17.05■□□□□ 0.32
HDAC7-227ENST00000548080 ELOCQ15369 112 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 TSNAXIP1Q2TAA8 658 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 PYCR3Q53H96 274 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms