RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 CDK12Q9NYV4 1490 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-216ENST00000545170 TRUB2O95900 331 aaKnown RBP8.52□□□□□ -1.05
ATXN3-216ENST00000545170 CYP2C18P33260 490 aa8.52□□□□□ -1.05
ATXN3-216ENST00000545170 DSG2Q14126 1118 aa8.52□□□□□ -1.05
ATXN3-216ENST00000545170 ALG11Q2TAA5 492 aa8.52□□□□□ -1.05
ATXN3-216ENST00000545170 FAIM2Q9BWQ8 316 aa8.52□□□□□ -1.05
ATXN3-216ENST00000545170 ATP13A3Q9H7F0 1226 aa8.52□□□□□ -1.05
ATXN3-216ENST00000545170 C3orf14Q9HBI5 128 aa8.52□□□□□ -1.05
ATXN3-216ENST00000545170 MAP4K5Q9Y4K4 846 aa8.52□□□□□ -1.05
ATXN3-216ENST00000545170 DAPL1A0PJW8 107 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 ICMTO60725 284 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 GADD45GO95257 159 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 PRKCAP17252 672 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 ALDH3B1P43353 468 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 MAGEB1P43366 347 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 APLP1P51693 650 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 SRSF11Q05519 484 aaKnown RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 ADIGQ0VDE8 80 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 C2orf76Q3KRA6 126 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 TBC1D25Q3MII6 688 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 SLC9B1Q4ZJI4 515 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 GPR139Q6DWJ6 353 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 TMEM161BQ8NDZ6 487 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 CCDC54Q8NEL0 328 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 KLHL6Q8WZ60 621 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 EDEM1Q92611 657 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 SLC19A2O60779 497 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 NME6O75414 186 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 RASGRP1O95267 797 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 TRBC1P01850 177 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 H2AFB2P0C5Z0 115 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 ENDOUP21128 410 aaKnown RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 FOXN2P32314 431 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 TUBP50607 506 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 NTRK3Q16288 839 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 PPM1JQ5JR12 505 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 GPR158Q5T848 1215 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 ZNF697Q5TEC3 545 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 SMARCD3Q6STE5 483 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 TMBIM1Q969X1 311 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 ASB9Q96DX5 294 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 SCGB3A2Q96PL1 93 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 MROH8Q9H579 483 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 A8MVJ9 347 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 IFNW1P05000 195 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 AFF3P51826 1226 aaKnown RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 DBPQ10586 325 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 KLF1Q13351 362 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 CPSF6Q16630 551 aaKnown RBP eCLIP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 CARD16Q5EG05 197 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 DCST2Q5T1A1 773 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 NOXA1Q86UR1 476 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 SCUBE3Q8IX30 993 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 OR6J1Q8NGC5 347 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 CPB2Q96IY4 423 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 HNRNPABQ99729 332 aaKnown RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 MTMR4Q9NYA4 1195 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 UBXN7O94888 489 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 LCKP06239 509 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 COL6A2P12110 1019 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 MANFP55145 182 aaKnown RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 CTBP2P56545 445 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 NCS1P62166 190 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 EXOC3L2Q2M3D2 409 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 HSDL1Q3SXM5 330 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 IER5Q5VY09 327 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 C14orf80Q86SX3 495 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 PGBD3Q8N328 593 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 ANKFN1Q8N957 763 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 OR8S1Q8NH09 359 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 HEXDCQ8WVB3 486 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 FBXO32Q969P5 355 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 EBF4Q9BQW3 602 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 CCDC106Q9BWC9 280 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 MTG2Q9H4K7 406 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 C17orf75Q9HAS0 396 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 ARMC1Q9NVT9 282 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 STK32BQ9NY57 414 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 CNOT11Q9UKZ1 510 aaKnown RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 TSPAN15O95858 294 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 GTF2IRD2BQ6EKJ0 949 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 SV2AQ7L0J3 742 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 GTF2IRD2Q86UP8 949 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 ZNF248Q8NDW4 579 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 PIGXQ8TBF5 258 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 GTF2H4Q92759 462 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 PTERQ96BW5 349 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 LINGO1Q96FE5 620 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 PAK1IP1Q9NWT1 392 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 GULP1Q9UBP9 304 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 hCG_1818297A0A087WSY0 165 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 TEX51A0A1B0GUA7 166 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 PAK4O96013 591 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 CERS1P27544 350 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 MTPNP58546 118 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 FASTKD3Q14CZ7 662 aaKnown RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 CLVS2Q5SYC1 327 aa8.51□□□□□ -1.05
ATXN3-216ENST00000545170 CDCA2Q69YH5 1023 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-216ENST00000545170 ZDHHC17Q8IUH5 632 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms