RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	CDH13	P55290	713 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	IL11RA	Q14626	422 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	RBBP5	Q15291	538 aa	Known RBP	3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	SNAPC1	Q16533	368 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	TMEM266	Q2M3C6	531 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	CBWD6	Q4V339	395 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	ASPRV1	Q53RT3	343 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	CBWD3	Q5JTY5	395 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	CCNYL2	Q5T2Q4	361 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	ERMARD	Q5T6L9	678 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	SLC30A6	Q6NXT4	461 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	DENND5B	Q6ZUT9	1274 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	CRYBG2	Q8N1P7	616 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	POGLUT1	Q8NBL1	392 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	KCTD6	Q8NC69	237 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	MOSPD2	Q8NHP6	518 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	CFAP61	Q8NHU2	1237 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	ZFAND2B	Q8WV99	257 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	SNRNP27	Q8WVK2	155 aa	Known RBP	3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	ERP27	Q96DN0	273 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	MTERF3	Q96E29	417 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	ALG14	Q96F25	216 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	ST6GAL2	Q96JF0	529 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	MS4A10	Q96PG2	267 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	OLFM1	Q99784	485 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	TRMT61B	Q9BVS5	477 aa	Known RBP	3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	CCDC106	Q9BWC9	280 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	MMP28	Q9H239	520 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	APOBEC3G	Q9HC16	384 aa	Known RBP	3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	TAB2	Q9NYJ8	693 aa		3.97	□□□□□ -1.77
RAP1B-231	ENST00000544639	TCRBV21S2A2	A0A5A6	115 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	FEZF1	A0PJY2	475 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	ELOVL7	A1L3X0	281 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	FAM172BP	A6NC97	362 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	UBE2C	O00762	179 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	XRCC3	O43542	346 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	TIMM44	O43615	452 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	FGF17	O60258	216 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	OR10H2	O60403	315 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	SYNCRIP	O60506	623 aa	Known RBP	3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	PLOD3	O60568	738 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	ZNF432	O94892	652 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	IGLV2-11	P01706	119 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	CKMT2	P17540	419 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	MATR3	P43243	847 aa	Known RBP eCLIP	3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	PSMC4	P43686	418 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	THOP1	P52888	689 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	UBXN2A	P68543	259 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	SNTB1	Q13884	538 aa	Known RBP	3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	STPG1	Q5TH74	334 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	C19orf48	Q6RUI8	117 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	LINGO4	Q6UY18	593 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	PLPPR4	Q7Z2D5	763 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	TMEM173	Q86WV6	379 aa	Predicted RBP	3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	GPALPP1	Q8IXQ4	340 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	ZNF595	Q8IYB9	648 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	NME8	Q8N427	588 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	LMNTD1	Q8N9Z9	388 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	TSPAN14	Q8NG11	270 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	ZNF473	Q8WTR7	871 aa	Known RBP	3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	SPACA9	Q96E40	222 aa	Predicted RBP	3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	NODAL	Q96S42	347 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	GOLPH3L	Q9H4A5	285 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	EQTN	Q9NQ60	294 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	TCF7L2	Q9NQB0	619 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	SLC38A7	Q9NVC3	462 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	OSER1	Q9NX31	292 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	GRIP1	Q9Y3R0	1128 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	NME7	Q9Y5B8	376 aa		3.96	□□□□□ -1.78
RAP1B-231	ENST00000544639	MED19	A0JLT2	244 aa	Predicted RBP	3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	ANKUB1	A6NFN9	424 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	PRR23D1	E9PI22	279 aa	Predicted RBP	3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	LMX1B	O60663	402 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	PSMD10	O75832	226 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	UMOD	P07911	640 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	PRR23D2	P0DMB1	279 aa	Predicted RBP	3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	ACP2	P11117	423 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	PAX1	P15863	534 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	MSH3	P20585	1137 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	DNASE1	P24855	282 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	DCT	P40126	519 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	NR2C2	P49116	596 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	CCR3	P51677	355 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	ALCAM	Q13740	583 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	C9orf152	Q5JTZ5	239 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	RPUSD3	Q6P087	351 aa	Known RBP	3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	ANO5	Q75V66	913 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	CAMKMT	Q7Z624	323 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	CUZD1	Q86UP6	607 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	CEP57L1	Q8IYX8	460 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	CPSF7	Q8N684	471 aa	Known RBP	3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	TC2N	Q8N9U0	490 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	KLHDC9	Q8NEP7	349 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	EXD1	Q8NHP7	514 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	ZNF830	Q96NB3	372 aa	Predicted RBP	3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	INPP4A	Q96PE3	977 aa	Predicted RBP	3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	FNDC11	Q9BVV2	318 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	GPR88	Q9GZN0	384 aa		3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	TFB2M	Q9H5Q4	396 aa	Known RBP	3.95	□□□□□ -1.78
RAP1B-231	ENST00000544639	ANKZF1	Q9H8Y5	726 aa		3.95	□□□□□ -1.78

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