RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ZNF658BQ4V348 819 aaPredicted RBP22.69■■□□□ 1.22
CHFR-222ENST00000544093 ARMC6Q6NXE6 501 aa22.69■■□□□ 1.22
CHFR-222ENST00000544093 LRRC8BQ6P9F7 803 aa22.69■■□□□ 1.22
CHFR-222ENST00000544093 KMT5CQ86Y97 462 aa22.69■■□□□ 1.22
CHFR-222ENST00000544093 ZSCAN1Q8NBB4 408 aa22.69■■□□□ 1.22
CHFR-222ENST00000544093 ACVR1CQ8NER5 493 aa22.69■■□□□ 1.22
CHFR-222ENST00000544093 KLHL6Q8WZ60 621 aa22.69■■□□□ 1.22
CHFR-222ENST00000544093 OR52A5Q9H2C5 316 aa22.69■■□□□ 1.22
CHFR-222ENST00000544093 MVB12BQ9H7P6 319 aa22.69■■□□□ 1.22
CHFR-222ENST00000544093 SEMA5BQ9P283 1151 aa22.69■■□□□ 1.22
CHFR-222ENST00000544093 SLC2A6Q9UGQ3 507 aa22.69■■□□□ 1.22
CHFR-222ENST00000544093 OR51F1A6NGY5 319 aa22.68■■□□□ 1.22
CHFR-222ENST00000544093 EIF4E1BA6NMX2 242 aaKnown RBP22.68■■□□□ 1.22
CHFR-222ENST00000544093 ATXN7O15265 892 aaPredicted RBP22.68■■□□□ 1.22
CHFR-222ENST00000544093 CYP1B1Q16678 543 aa22.68■■□□□ 1.22
CHFR-222ENST00000544093 SOWAHCQ53LP3 525 aaPredicted RBP22.68■■□□□ 1.22
CHFR-222ENST00000544093 FAM92BQ6ZTR7 304 aa22.68■■□□□ 1.22
CHFR-222ENST00000544093 MPP5Q8N3R9 675 aa22.68■■□□□ 1.22
CHFR-222ENST00000544093 LILRA3Q8N6C8 439 aaPredicted RBP22.68■■□□□ 1.22
CHFR-222ENST00000544093 ACTRT1Q8TDG2 376 aa22.68■■□□□ 1.22
CHFR-222ENST00000544093 PMEPA1Q969W9 287 aa22.68■■□□□ 1.22
CHFR-222ENST00000544093 WBP1Q96G27 269 aa22.68■■□□□ 1.22
CHFR-222ENST00000544093 ZNF778Q96MU6 729 aa22.68■■□□□ 1.22
CHFR-222ENST00000544093 TRIT1Q9H3H1 467 aaKnown RBP22.68■■□□□ 1.22
CHFR-222ENST00000544093 MRM3Q9HC36 420 aaKnown RBP22.68■■□□□ 1.22
CHFR-222ENST00000544093 CHRAC1Q9NRG0 131 aa22.68■■□□□ 1.22
CHFR-222ENST00000544093 HRASLS2Q9NWW9 162 aa22.68■■□□□ 1.22
CHFR-222ENST00000544093 TLCD2A6NGC4 264 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 NELFEP18615 380 aaKnown RBP22.67■■□□□ 1.22
CHFR-222ENST00000544093 MAGEA6P43360 314 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 TTPAP49638 278 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 SEPHS1P49903 392 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 PRKAA1Q13131 559 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 DNTTIP2Q5QJE6 756 aaKnown RBP22.67■■□□□ 1.22
CHFR-222ENST00000544093 DUS1LQ6P1R4 473 aaKnown RBP22.67■■□□□ 1.22
CHFR-222ENST00000544093 SLC35F6Q8N357 371 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 IL22RA1Q8N6P7 574 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 GRK7Q8WTQ7 553 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 NKD1Q969G9 470 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 OSBPL9Q96SU4 736 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 KCNF1Q9H3M0 494 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 TREX1Q9NSU2 369 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 CATSPERZQ9NTU4 200 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 PILRAQ9UKJ1 303 aa22.67■■□□□ 1.22
CHFR-222ENST00000544093 KRT14P02533 472 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 MAP4P27816 1152 aaKnown RBP22.66■■□□□ 1.22
CHFR-222ENST00000544093 FOXM1Q08050 763 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 GPS1Q13098 491 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 SYTL3Q4VX76 610 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 CCDC137Q6PK04 289 aaKnown RBP22.66■■□□□ 1.22
CHFR-222ENST00000544093 ZNF534Q76KX8 674 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 BPHLQ86WA6 291 aaPredicted RBP22.66■■□□□ 1.22
CHFR-222ENST00000544093 NLGN4XQ8N0W4 816 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 NLGN4YQ8NFZ3 816 aaPredicted RBP22.66■■□□□ 1.22
CHFR-222ENST00000544093 ELMO1Q92556 727 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 TFGQ92734 400 aaPredicted RBP22.66■■□□□ 1.22
CHFR-222ENST00000544093 MS4A14Q96JA4 679 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 FERD3LQ96RJ6 166 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 CTRCQ99895 268 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 KIFC1Q9BW19 673 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 AP1M1Q9BXS5 423 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 TFB2MQ9H5Q4 396 aaKnown RBP22.66■■□□□ 1.22
CHFR-222ENST00000544093 SNX12Q9UMY4 172 aa22.66■■□□□ 1.22
CHFR-222ENST00000544093 TMEM184BQ9Y519 407 aaPredicted RBP22.66■■□□□ 1.22
CHFR-222ENST00000544093 ATMQ13315 3056 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 EFSO43281 561 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 KIF1CO43896 1103 aaKnown RBP22.65■■□□□ 1.22
CHFR-222ENST00000544093 RAD1O60671 282 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 COILP38432 576 aaPredicted RBP22.65■■□□□ 1.22
CHFR-222ENST00000544093 FNTAP49354 379 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 ARL4DP49703 201 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 MAP7Q14244 749 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 KCNJ11Q14654 390 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 TTC27Q6P3X3 843 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 CACNA2D3Q8IZS8 1091 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 LCN9Q8WX39 176 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 SLC41A2Q96JW4 573 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 PDLIM2Q96JY6 352 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 OR6C1Q96RD1 312 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 EFHD1Q9BUP0 239 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 SPRY4Q9C004 299 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 SRMSQ9H3Y6 488 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 PRSS21Q9Y6M0 314 aa22.65■■□□□ 1.22
CHFR-222ENST00000544093 UBA6A0AVT1 1052 aaPredicted RBP22.64■■□□□ 1.21
CHFR-222ENST00000544093 OR6C74A6NCV1 312 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 PFDN6O15212 129 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 CD3EAPO15446 510 aaKnown RBP22.64■■□□□ 1.21
CHFR-222ENST00000544093 KDM1AO60341 852 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 PHF2O75151 1096 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 STK17BO94768 372 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 MLNP12872 115 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 PDHA2P29803 388 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 PREPP48147 710 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 HSD11B2P80365 405 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 ACY1Q03154 408 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 BOP1Q14137 746 aaKnown RBP22.64■■□□□ 1.21
CHFR-222ENST00000544093 TRIP13Q15645 432 aaPredicted RBP22.64■■□□□ 1.21
CHFR-222ENST00000544093 LRRC6Q86X45 466 aa22.64■■□□□ 1.21
CHFR-222ENST00000544093 JPH3Q8WXH2 748 aaPredicted RBP22.64■■□□□ 1.21
CHFR-222ENST00000544093 KIAA1143Q96AT1 154 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms