RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 TRIM39Q9HCM9 518 aa19.44■□□□□ 0.7
COPS7A-218ENST00000543939 WWOXQ9NZC7 414 aa19.44■□□□□ 0.7
COPS7A-218ENST00000543939 DOCK9Q9BZ29 2069 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 A0A1W2PQF6 199 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 SLC5A10A0PJK1 596 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 B2RBV5 119 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 LILRB5O75023 590 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 KLF8O95600 359 aaPredicted RBP19.43■□□□□ 0.7
COPS7A-218ENST00000543939 ELF3P78545 371 aaPredicted RBP19.43■□□□□ 0.7
COPS7A-218ENST00000543939 GTF2H2Q13888 395 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 AGERQ15109 404 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 GTF2H2CQ6P1K8 395 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 ADAMTSL4Q6UY14 1074 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 LARP4Q71RC2 724 aaKnown RBP eCLIP19.43■□□□□ 0.71e-6■■■□□ 16.7
COPS7A-218ENST00000543939 TEX9Q8N6V9 391 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 PLA2G15Q8NCC3 412 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 GLMNQ92990 594 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 C3orf30Q96M34 536 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 FAM161BQ96MY7 647 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 NUSAP1Q9BXS6 441 aaKnown RBP19.43■□□□□ 0.7
COPS7A-218ENST00000543939 OR2AG1Q9H205 316 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 TUBB1Q9H4B7 451 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 NOL11Q9H8H0 719 aaKnown RBP19.43■□□□□ 0.7
COPS7A-218ENST00000543939 G3BP2Q9UN86 482 aaKnown RBP19.43■□□□□ 0.7
COPS7A-218ENST00000543939 XIRP2A4UGR9 3374 aa19.43■□□□□ 0.7
COPS7A-218ENST00000543939 ZFC3H1O60293 1989 aaKnown RBP19.43■□□□□ 0.7
COPS7A-218ENST00000543939 OR7A17O14581 309 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 GYG2O15488 501 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 RNASEH2AO75792 299 aaKnown RBP19.42■□□□□ 0.7
COPS7A-218ENST00000543939 PCDH8O95206 1070 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 ANXA5P08758 320 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 UROSP10746 265 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 HOXB2P14652 356 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 COL9A1P20849 921 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 GRSF1Q12849 480 aaKnown RBP eCLIP19.42■□□□□ 0.7
COPS7A-218ENST00000543939 CDC16Q13042 620 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 MBOAT1Q6ZNC8 495 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 PLCD3Q8N3E9 789 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 OR52B6Q8NGF0 335 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 SKA2Q8WVK7 121 aaPredicted RBP19.42■□□□□ 0.7
COPS7A-218ENST00000543939 CMTM5Q96DZ9 223 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 COX14Q96I36 57 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 CADM1Q9BY67 442 aaKnown RBP19.42■□□□□ 0.7
COPS7A-218ENST00000543939 TRIM54Q9BYV2 358 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 UBE2ZQ9H832 354 aaPredicted RBP19.42■□□□□ 0.7
COPS7A-218ENST00000543939 CD248Q9HCU0 757 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.42■□□□□ 0.7
COPS7A-218ENST00000543939 ATXN10Q9UBB4 475 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 ST14Q9Y5Y6 855 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 PIP5K1BO14986 540 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 CRCPO75575 148 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 MATN4O95460 622 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 PIK3R1P27986 724 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 ERVPABLB-1P60509 514 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 MRPS21P82921 87 aaKnown RBP19.42■□□□□ 0.7
COPS7A-218ENST00000543939 WSCD2Q2TBF2 565 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 SYTL3Q4VX76 610 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 IER5LQ5T953 404 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 PNCKQ6P2M8 343 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 EFL1Q7Z2Z2 1120 aaKnown RBP19.42■□□□□ 0.7
COPS7A-218ENST00000543939 TRMT11Q7Z4G4 463 aaKnown RBP19.42■□□□□ 0.7
COPS7A-218ENST00000543939 LONP2Q86WA8 852 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 POU5F2Q8N7G0 328 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 FBXO27Q8NI29 283 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 TMEM159Q96B96 161 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 HIC2Q96JB3 615 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 FBXL12Q9NXK8 326 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 ARL15Q9NXU5 204 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 STK38LQ9Y2H1 464 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 TIMM22Q9Y584 194 aa19.42■□□□□ 0.7
COPS7A-218ENST00000543939 COPG1Q9Y678 874 aaKnown RBP19.42■□□□□ 0.7
COPS7A-218ENST00000543939 GIPC1O14908 333 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 GSC2O15499 205 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 VEGFDO43915 354 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 OR4F21O95013 312 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 COX4I1P13073 169 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 GGT5P36269 586 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 FBXW10Q5XX13 1052 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 LETMD1Q6P1Q0 360 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 TTC23LQ6PF05 361 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 TMPRSS6Q8IU80 811 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 RBM15BQ8NDT2 890 aaKnown RBP19.41■□□□□ 0.7
COPS7A-218ENST00000543939 ZNF514Q96K75 400 aaPredicted RBP19.41■□□□□ 0.7
COPS7A-218ENST00000543939 MARK4Q96L34 752 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 LENG8Q96PV6 779 aaPredicted RBP19.41■□□□□ 0.7
COPS7A-218ENST00000543939 C1orf21Q9H246 121 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 IPPKQ9H8X2 491 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 KLC4Q9NSK0 619 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 OPTCQ9UBM4 332 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 GULP1Q9UBP9 304 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 PTGDR2Q9Y5Y4 395 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 TRIOBPQ9H2D6 2365 aa19.41■□□□□ 0.7
COPS7A-218ENST00000543939 ATP6AP2A0A1C7CYW4 349 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 K7EPI3 171 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 CCNT2O60583 730 aaKnown RBP19.4■□□□□ 0.7
COPS7A-218ENST00000543939 ATP6AP2O75787 350 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 GSTM1P09488 218 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 HIST1H2AGP0C0S8 130 aaPredicted RBP19.4■□□□□ 0.7
COPS7A-218ENST00000543939 HIST1H2ADP20671 130 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 CYP2A7P20853 494 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms