RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 PRAMEF1O95521 474 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 SNAP29O95721 258 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 GUCA1CO95843 209 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 ALPIP09923 528 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 MBL2P11226 248 aaPredicted RBP13.25□□□□□ -0.29
PPME1-208ENST00000543525 ITGB6P18564 788 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 HOXD10P28358 340 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 AKT1P31749 480 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 DGKQP52824 942 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 MTPNP58546 118 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 CAP1Q01518 475 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 SP3Q02447 781 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 SELPLGQ14242 412 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 RFTN2Q52LD8 501 aaPredicted RBP13.25□□□□□ -0.29
PPME1-208ENST00000543525 CACHD1Q5VU97 1274 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 KIAA1841Q6NSI8 718 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 METTL2BQ6P1Q9 378 aaKnown RBP13.25□□□□□ -0.29
PPME1-208ENST00000543525 DHRS4L2Q6PKH6 230 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 GPR180Q86V85 440 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 OFCC1Q8IZS5 231 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 DTWD1Q8N5C7 304 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 ZBTB2Q8N680 514 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 GLB1L3Q8NCI6 653 aaPredicted RBP13.25□□□□□ -0.29
PPME1-208ENST00000543525 PNPT1Q8TCS8 783 aaKnown RBP13.25□□□□□ -0.29
PPME1-208ENST00000543525 SLC13A3Q8WWT9 602 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 GAB3Q8WWW8 586 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 TRMT2BQ96GJ1 504 aaKnown RBP13.25□□□□□ -0.29
PPME1-208ENST00000543525 CCDC115Q96NT0 180 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 CD244Q9BZW8 370 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 NSUN3Q9H649 340 aaKnown RBP13.25□□□□□ -0.29
PPME1-208ENST00000543525 ZFYVE1Q9HBF4 777 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 OPTCQ9UBM4 332 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 SRRDQ9UH36 339 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 VPS51Q9UID3 782 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 BPTFQ12830 3046 aa13.25□□□□□ -0.29
PPME1-208ENST00000543525 ZFC3H1O60293 1989 aaKnown RBP13.24□□□□□ -0.29
PPME1-208ENST00000543525 C2orf78A6NCI8 922 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 SLC25A14O95258 325 aaPredicted RBP13.24□□□□□ -0.29
PPME1-208ENST00000543525 PRAMEF12O95522 483 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 CLIC3O95833 236 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 MT-ND1P03886 318 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 NFKBIAP25963 317 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 CSKP41240 450 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 ALDH7A1P49419 539 aaKnown RBP13.24□□□□□ -0.29
PPME1-208ENST00000543525 ALDH3A2P51648 485 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 RPL38P63173 70 aaKnown RBP13.24□□□□□ -0.29
PPME1-208ENST00000543525 DAG1Q14118 895 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 GPNMBQ14956 572 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 VEPH1Q14D04 833 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 DCAF4L2Q8NA75 395 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 ZNF420Q8TAQ5 688 aaPredicted RBP13.24□□□□□ -0.29
PPME1-208ENST00000543525 FAM81AQ8TBF8 368 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 UBTD2Q8WUN7 234 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 EID2BQ96D98 161 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 HBEGFQ99075 208 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 SH3GL1Q99961 368 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 DPY30Q9C005 99 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 HIPK3Q9H422 1215 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 GORASP2Q9H8Y8 452 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 LIN28AQ9H9Z2 209 aaKnown RBP13.24□□□□□ -0.29
PPME1-208ENST00000543525 CXorf21Q9HAI6 301 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 ELOVL2Q9NXB9 296 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.24□□□□□ -0.29
PPME1-208ENST00000543525 TRPS1Q9UHF7 1281 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 CCL27Q9Y4X3 112 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 PCDHGA11Q9Y5H2 935 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 OR51B4Q9Y5P0 310 aa13.24□□□□□ -0.29
PPME1-208ENST00000543525 RSL1D1O76021 490 aaKnown RBP13.23□□□□□ -0.29
PPME1-208ENST00000543525 PRSS23O95084 383 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 TRIM16O95361 564 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 HPRP00739 348 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 MAPK8P45983 427 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 GNPDA1P46926 289 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 SMAD3P84022 425 aaKnown RBP13.23□□□□□ -0.29
PPME1-208ENST00000543525 BCL2L1Q07817 233 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 CDH18Q13634 790 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 KIAA0040Q15053 153 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 TPGS2Q68CL5 300 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 TBPL2Q6SJ96 375 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 OR2T12Q8NG77 320 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 LZICQ8WZA0 190 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 TMBIM1Q969X1 311 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 C12orf43Q96C57 262 aaKnown RBP13.23□□□□□ -0.29
PPME1-208ENST00000543525 SDCCAG3Q96C92 435 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 ZNF583Q96ND8 569 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 APOL5Q9BWW9 433 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 POLR1BQ9H9Y6 1135 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 NTN4Q9HB63 628 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 SMPD4Q9NXE4 827 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 ASIC5Q9NY37 505 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 DNMT3BQ9UBC3 853 aaKnown RBP13.23□□□□□ -0.29
PPME1-208ENST00000543525 CRLS1Q9UJA2 301 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 YIPF1Q9Y548 306 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 TRBV5-4A0A0C4DH59 114 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 C1orf232A0A0U1RR37 186 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 K7EPI3 171 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 GAPDHSO14556 408 aaPredicted RBP13.23□□□□□ -0.29
PPME1-208ENST00000543525 DFNA5O60443 496 aa13.23□□□□□ -0.29
PPME1-208ENST00000543525 ULK1O75385 1050 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms