RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 TARM1B6A8C7 271 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 TLR4O00206 839 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 SCAMP1O15126 338 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 BCAT2O15382 392 aaPredicted RBP10.45□□□□□ -0.74
DDB1-221ENST00000543162 BIRC5O15392 142 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 SMIM24O75264 130 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 RASGRP1O95267 797 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 TNFP01375 233 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 WNT1P04628 370 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 C8GP07360 202 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 BPGMP07738 259 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 SBK3P0C264 359 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 ITPKAP23677 461 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 PDHA2P29803 388 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 MAPK9P45984 424 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 AFF3P51826 1226 aaKnown RBP10.45□□□□□ -0.74
DDB1-221ENST00000543162 DMPKQ09013 629 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 ABRQ12979 859 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 EIF2B5Q13144 721 aaKnown RBP10.45□□□□□ -0.74
DDB1-221ENST00000543162 LRP8Q14114 963 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 ANGPT1Q15389 498 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 TEAD4Q15561 434 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 PLK5Q496M5 336 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 METRNLQ641Q3 311 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 TTC19Q6DKK2 380 aaPredicted RBP10.45□□□□□ -0.74
DDB1-221ENST00000543162 LAYNQ6UX15 382 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 ZYG11AQ6WRX3 759 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 FRA10AC1Q70Z53 315 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 PARGQ86W56 976 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 NUDCD3Q8IVD9 361 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 TMEM151AQ8N4L1 468 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 SREK1Q8WXA9 508 aaKnown RBP10.45□□□□□ -0.74
DDB1-221ENST00000543162 ASB11Q8WXH4 323 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 EXT2Q93063 718 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 SKA1Q96BD8 255 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 FOPNLQ96NB1 174 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 DPEP2Q9H4A9 486 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 ACSL5Q9ULC5 683 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 KCNK6Q9Y257 313 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 DGKBQ9Y6T7 804 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 VCANP13611 3396 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 PABPN1LA6NDY0 278 aaKnown RBP10.44□□□□□ -0.74
DDB1-221ENST00000543162 PRR5-ARHGAP8B1AHC4 643 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 SUPT3HB4E1H0 165 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 G3V2L1 256 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 UBXN8O00124 270 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 VILLO15195 856 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 SLC16A5O15375 505 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 DLX3O60479 287 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 SUPT3HO75486 399 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 MATN4O95460 622 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 S100BP04271 92 aaPredicted RBP10.44□□□□□ -0.74
DDB1-221ENST00000543162 SLC35G4P0C7Q5 338 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 TPBGLP0DKB5 382 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 GNSP15586 552 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 IDSP22304 550 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 KCNA4P22459 653 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 ATP5F1P24539 256 aaPredicted RBP10.44□□□□□ -0.74
DDB1-221ENST00000543162 ALDH3A1P30838 453 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 KCNC1P48547 511 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 CSNK1EP49674 416 aaKnown RBP10.44□□□□□ -0.74
DDB1-221ENST00000543162 BLKP51451 505 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 HK3P52790 923 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 C21orf59P57076 290 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 SP140Q13342 867 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 PCLAFQ15004 111 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 ZNF542PQ5EBM4 170 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 SBSNQ6UWP8 590 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 XKR5Q6UX68 686 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 UBE2R2Q712K3 238 aaPredicted RBP10.44□□□□□ -0.74
DDB1-221ENST00000543162 PDZD3Q86UT5 571 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 C10orf107Q8IVU9 208 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 TRIM42Q8IWZ5 723 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 PHACTR4Q8IZ21 702 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 CFAP61Q8NHU2 1237 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 PPP1R14CQ8TAE6 165 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 CKAP2Q8WWK9 683 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 CCDC126Q96EE4 140 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 ATOH8Q96SQ7 321 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 MECRQ9BV79 373 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 CAPS2Q9BXY5 557 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 TRIM54Q9BYV2 358 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 TMEM168Q9H0V1 697 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 OR52A5Q9H2C5 316 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 TRNAU1APQ9NX07 287 aaKnown RBP10.44□□□□□ -0.74
DDB1-221ENST00000543162 DNAJC28Q9NX36 388 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 UTP6Q9NYH9 597 aaKnown RBP10.44□□□□□ -0.74
DDB1-221ENST00000543162 CD274Q9NZQ7 290 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 ADAM21Q9UKJ8 722 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 ADAMTS6Q9UKP5 1117 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 PNMA8BQ9ULN7 279 aaPredicted RBP10.44□□□□□ -0.74
DDB1-221ENST00000543162 TMCO1Q9UM00 188 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 PSMD13Q9UNM6 376 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 PLEKHM1Q9Y4G2 1056 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 OARD1Q9Y530 152 aa10.44□□□□□ -0.74
DDB1-221ENST00000543162 SPAG17Q6Q759 2223 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 LRP4O75096 1905 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 KMT2EQ8IZD2 1858 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 ATXN2Q99700 1313 aaKnown RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 A0A1B0GTW7 788 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms