RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 KCNAB1Q14722 419 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 CAPRIN2Q6IMN6 1127 aaKnown RBP12.79□□□□□ -0.36
RTN3-212ENST00000543123 PWWP2BQ6NUJ5 590 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 DUS1LQ6P1R4 473 aaKnown RBP12.79□□□□□ -0.36
RTN3-212ENST00000543123 TMEM126BQ8IUX1 230 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 LRRC57Q8N9N7 239 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 ACVR1CQ8NER5 493 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 OR13C4Q8NGS5 318 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 CT55Q8WUE5 264 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 LCN9Q8WX39 176 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 ALG3Q92685 438 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 ABHD17AQ96GS6 310 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 RMDN2Q96LZ7 410 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 FAM118BQ9BPY3 351 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 SYTL2Q9HCH5 934 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 LATS2Q9NRM7 1088 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 ZDHHC3Q9NYG2 299 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 BTRCQ9Y297 605 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 MAN2B2Q9Y2E5 1009 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 MRPS18BQ9Y676 258 aaKnown RBP12.79□□□□□ -0.36
RTN3-212ENST00000543123 KCNMB2Q9Y691 235 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 DUSP10Q9Y6W6 482 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 IGLV3-16A0A075B6K0 115 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 GRID2IPA4D2P6 1211 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 F8W8V4 182 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 H7C0S8 307 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 SCRG1O75711 98 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 GAS8O95995 478 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 CDH3P22223 829 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 F8A1P23610 371 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 ACRV1P26436 265 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 CA5AP35218 305 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 CD151P48509 253 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 PMS2P54278 862 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 GSDMDP57764 484 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 TMPRSS15P98073 1019 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 RPA4Q13156 261 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 OLIG2Q13516 323 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 ZRANB3Q5FWF4 1079 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 ATP1A1-AS1Q5TC04 95 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 DENND5AQ6IQ26 1287 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 KLHDC8BQ8IXV7 354 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
RTN3-212ENST00000543123 THAP4Q8WY91 577 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 DNAJC1Q96KC8 554 aaKnown RBP12.78□□□□□ -0.36
RTN3-212ENST00000543123 BAG1Q99933 345 aaPredicted RBP12.78□□□□□ -0.36
RTN3-212ENST00000543123 LACRTQ9GZZ8 138 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 EPN3Q9H201 632 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 SRMSQ9H3Y6 488 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 ACTL8Q9H568 366 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 MVB12BQ9H7P6 319 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 COG4Q9H9E3 785 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 ZNF71Q9NQZ8 489 aaPredicted RBP12.78□□□□□ -0.36
RTN3-212ENST00000543123 C1GALT1Q9NS00 363 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 KCND1Q9NSA2 647 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 NLE1Q9NVX2 485 aaPredicted RBP12.78□□□□□ -0.36
RTN3-212ENST00000543123 POMT2Q9UKY4 750 aa12.78□□□□□ -0.36
RTN3-212ENST00000543123 GSAPA4D1B5 854 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 CDC14CA4D256 554 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 ARHGAP6O43182 974 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 LDB2O43679 373 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 SGTAO43765 313 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 AP2A2O94973 939 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 TIAF1O95411 115 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 KLK3P07288 261 aaPredicted RBP12.77□□□□□ -0.37
RTN3-212ENST00000543123 CACNG1Q06432 222 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 KLRB1Q12918 225 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 MSLNQ13421 630 aaPredicted RBP12.77□□□□□ -0.37
RTN3-212ENST00000543123 LAMB3Q13751 1172 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 SPARCL1Q14515 664 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 TCTN3Q6NUS6 607 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 RAD9BQ6WBX8 426 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 TAS2R42Q7RTR8 314 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 SYVN1Q86TM6 617 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 LINC00523Q86TU6 105 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 SERPINA9Q86WD7 417 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 FAM71DQ8N9W8 422 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 ACRBPQ8NEB7 543 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 OR4E2Q8NGC2 313 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 STYXQ8WUJ0 223 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 CPT1BQ92523 772 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.77□□□□□ -0.37
RTN3-212ENST00000543123 FERD3LQ96RJ6 166 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 FAM96AQ9H5X1 160 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 REXO2Q9Y3B8 237 aaKnown RBP12.77□□□□□ -0.37
RTN3-212ENST00000543123 HECTD1Q9ULT8 2610 aa12.77□□□□□ -0.37
RTN3-212ENST00000543123 FLNCQ14315 2725 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 TRBV5-4A0A0C4DH59 114 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 ERI2A8K979 691 aaKnown RBP12.76□□□□□ -0.37
RTN3-212ENST00000543123 KDM1AO60341 852 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 AP2A1O95782 977 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 FTH1P02794 183 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 NTRK1P04629 796 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 MSL3P1P0C860 447 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 POLR2CP19387 275 aaPredicted RBP12.76□□□□□ -0.37
RTN3-212ENST00000543123 PTPN4P29074 926 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 NSG1P42857 185 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 KPNA2P52292 529 aaKnown RBP12.76□□□□□ -0.37
RTN3-212ENST00000543123 POU6F1Q14863 301 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 GPR19Q15760 415 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms