RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 VANGL1Q8TAA9 524 aaPredicted RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 KLK6Q92876 244 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 TMBIM1Q969X1 311 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 RAD21L1Q9H4I0 556 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 MAGEL2Q9UJ55 1249 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 CNOT3O75175 753 aaKnown RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 DDX5P17844 614 aaKnown RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 OGNP20774 298 aaKnown RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 CAPN3P20807 821 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 ST13P50502 369 aaKnown RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 C6orf136Q5SQH8 315 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 BIRC7Q96CA5 298 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 CGREF1Q99674 301 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 ARIH1Q9Y4X5 557 aaPredicted RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 SCN1AP35498 2009 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 NRAPQ86VF7 1730 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 ZNF487B1APH4 448 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 I6L893 689 aaPredicted RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 HTRA2O43464 458 aaPredicted RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 LEPRP48357 1165 aaKnown RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 KCNC1P48547 511 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 APLP1P51693 650 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 HIPK1Q86Z02 1210 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 APOL4Q9BPW4 351 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 TMEM248Q9NWD8 314 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 TPRKBQ9Y3C4 175 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 PRKAB1Q9Y478 270 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 SLC28A1O00337 649 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 FPGTO14772 594 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 NOGQ13253 232 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 MYLK3Q32MK0 819 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 PDE12Q6L8Q7 609 aaKnown RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 USP22Q9UPT9 525 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 HEMK1Q9Y5R4 338 aaPredicted RBP15.84■□□□□ 0.13
VARS2-212ENST00000542001 KCNE2Q9Y6J6 123 aa15.84■□□□□ 0.13
VARS2-212ENST00000542001 CXCR6O00574 342 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 CNTN1Q12860 1018 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 GPR17Q13304 367 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 NANOGP8Q6NSW7 305 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 PPP4R4Q6NUP7 873 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 FAM180BQ6P0A1 224 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 KBTBD6Q86V97 674 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 SORCS1Q8WY21 1168 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 ROPN1LQ96C74 230 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 CAPNS2Q96L46 248 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 NSMCE3Q96MG7 304 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 FAM83DQ9H4H8 585 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 NANOGQ9H9S0 305 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 VPS51Q9UID3 782 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 IKZF3Q9UKT9 509 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 RBMX2Q9Y388 322 aaKnown RBP15.83■□□□□ 0.12
VARS2-212ENST00000542001 MAGED1Q9Y5V3 778 aaPredicted RBP15.83■□□□□ 0.12
VARS2-212ENST00000542001 BRWD1Q9NSI6 2320 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 ELK4P28324 431 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 RPS6KA3P51812 740 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 OR4D2P58180 307 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 SPIBQ01892 262 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 SYT16Q17RD7 645 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 PIGGQ5H8A4 983 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 RAVER1Q8IY67 606 aaKnown RBP15.83■□□□□ 0.12
VARS2-212ENST00000542001 KIAA1191Q96A73 305 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 SLAMF8Q9P0V8 285 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 KIAA1522Q9P206 1035 aaPredicted RBP15.83■□□□□ 0.12
VARS2-212ENST00000542001 ADAM12O43184 909 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 ANXA4P09525 319 aaPredicted RBP15.83■□□□□ 0.12
VARS2-212ENST00000542001 RRM2P31350 389 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 CTNNB1P35222 781 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 CPOXP36551 454 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 RPS14P62263 151 aaKnown RBP15.83■□□□□ 0.12
VARS2-212ENST00000542001 NFKB2Q00653 900 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 GOLGA7Q7Z5G4 137 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 THAP5Q7Z6K1 395 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 UMODL1-AS1Q8N2C9 162 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 ARL10Q8N8L6 244 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 OR5AK3PQ8NH89 298 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 VPS35Q96QK1 796 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 MTG2Q9H4K7 406 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 IGSF5Q9NSI5 407 aa15.83■□□□□ 0.12
VARS2-212ENST00000542001 NME4O00746 187 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 SOCS2O14508 198 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 ANGPTL1O95841 491 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 GALTP07902 379 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 IGFBP5P24593 272 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 MAGEA6P43360 314 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 HTRA3P83110 453 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 GTDC1Q4AE62 458 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 CYS1Q717R9 158 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 TAS1R1Q7RTX1 841 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 PIK3C3Q8NEB9 887 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 AP2M1Q96CW1 435 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 ITCHQ96J02 903 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 PREBQ9HCU5 417 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 SLCO3A1Q9UIG8 710 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 CACNA1CQ13936 2221 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 IFRD1O00458 451 aaPredicted RBP15.82■□□□□ 0.12
VARS2-212ENST00000542001 C8AP07357 584 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 MEP1AQ16819 746 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 CLLU1OSQ5K130 101 aa15.82■□□□□ 0.12
VARS2-212ENST00000542001 TRPV3Q8NET8 790 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms