RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 DGKBQ9Y6T7 804 aa9.16□□□□□ -0.94
DDX55-208ENST00000541259 FRYLO94915 3013 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 C17orf113A0A1B0GUU1 675 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 GOLGA6L10A6NI86 522 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 PRR19A6NJB7 356 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 F8W8V4 182 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 OPA1O60313 960 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 MAGEC1O60732 1142 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 TSPAN12O95859 305 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 CSF2P04141 144 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 CFIP05156 583 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 MPOP05164 745 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 CCDC166P0CW27 439 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 ZNF37AP17032 561 aaPredicted RBP9.15□□□□□ -0.94
DDX55-208ENST00000541259 KRT4P19013 534 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 SKIV2L2P42285 1042 aaKnown RBP9.15□□□□□ -0.94
DDX55-208ENST00000541259 SLC18A2Q05940 514 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 VAC14Q08AM6 782 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 ILF2Q12905 390 aaKnown RBP9.15□□□□□ -0.94
DDX55-208ENST00000541259 CSHL1Q14406 222 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 GBX1Q14549 363 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 DUOXA1Q1HG43 343 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 PLEKHS1Q5SXH7 462 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 AGBL2Q5U5Z8 902 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 UGT3A1Q6NUS8 523 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 ZC3H14Q6PJT7 736 aaKnown RBP9.15□□□□□ -0.94
DDX55-208ENST00000541259 CDHR3Q6ZTQ4 885 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 CLEC14AQ86T13 490 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 BPHLQ86WA6 291 aaPredicted RBP9.15□□□□□ -0.94
DDX55-208ENST00000541259 CENPLQ8N0S6 344 aaPredicted RBP9.15□□□□□ -0.94
DDX55-208ENST00000541259 ZNF511Q8NB15 262 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 ATOH1Q92858 354 aaPredicted RBP9.15□□□□□ -0.94
DDX55-208ENST00000541259 NXNL1Q96CM4 212 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 TLCD1Q96CP7 247 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 LINGO1Q96FE5 620 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 LOXL4Q96JB6 756 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 UBXN10Q96LJ8 280 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 TIMM29Q9BSF4 260 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 TSSK1BQ9BXA7 367 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 ACBD3Q9H3P7 528 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 COG4Q9H9E3 785 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 POPDC3Q9HBV1 291 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 CAPN10Q9HC96 672 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 IGSF5Q9NSI5 407 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 SUSD2Q9UGT4 822 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 TLK1Q9UKI8 766 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 PSMD13Q9UNM6 376 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 SMG5Q9UPR3 1016 aaKnown RBP9.15□□□□□ -0.94
DDX55-208ENST00000541259 RUVBL2Q9Y230 463 aaKnown RBP9.15□□□□□ -0.94
DDX55-208ENST00000541259 WDR37Q9Y2I8 494 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 ACOT9Q9Y305 439 aa9.15□□□□□ -0.94
DDX55-208ENST00000541259 A0A087X1B8 175 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 H3BQF6 201 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 CDC7O00311 574 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 LIN7AO14910 233 aaPredicted RBP9.14□□□□□ -0.95
DDX55-208ENST00000541259 KPNA5O15131 536 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 ZBTB14O43829 449 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 SNX2O60749 519 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 SDC3O75056 442 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 SLCO2B1O94956 709 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 EML2O95834 649 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 APOA4P06727 396 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 GSTM1P09488 218 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 CTSEP14091 401 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 NME1P15531 152 aaKnown RBP9.14□□□□□ -0.95
DDX55-208ENST00000541259 CD1DP15813 335 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 RPL10P27635 214 aaKnown RBP9.14□□□□□ -0.95
DDX55-208ENST00000541259 MPLP40238 635 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 CCNFP41002 786 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 SLC19A1P41440 591 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 IL2P60568 153 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 MAGOHP61326 146 aaKnown RBP9.14□□□□□ -0.95
DDX55-208ENST00000541259 IRX4P78413 519 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 GSTM4Q03013 218 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 DMPKQ09013 629 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 ABRQ12979 859 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 BNIP3Q12983 259 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 GRIK2Q13002 908 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 SHBQ15464 509 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 SEPT7Q16181 437 aaKnown RBP9.14□□□□□ -0.95
DDX55-208ENST00000541259 SYTL3Q4VX76 610 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 TAF1BQ53T94 588 aaPredicted RBP9.14□□□□□ -0.95
DDX55-208ENST00000541259 TRIM61Q5EBN2 209 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 PRRT3Q5FWE3 981 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 METRNLQ641Q3 311 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 TCEAL6Q6IPX3 200 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 C16orf46Q6P387 395 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 SLC30A9Q6PML9 568 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 PIWIL4Q7Z3Z4 852 aaKnown RBP9.14□□□□□ -0.95
DDX55-208ENST00000541259 SFTPA2Q8IWL1 248 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 BANPQ8N9N5 519 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 OR2I1PQ8NGU4 316 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 CEP76Q8TAP6 659 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 HM13Q8TCT9 377 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 GPBAR1Q8TDU6 330 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 ACMSDQ8TDX5 336 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 LMX1AQ8TE12 382 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 ASZ1Q8WWH4 475 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 TCEAL3Q969E4 200 aa9.14□□□□□ -0.95
DDX55-208ENST00000541259 SKA1Q96BD8 255 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms