RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FBXO30Q8TB52 745 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 LIMD1Q9UGP4 676 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 KDELR3O43731 214 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 DNAJB5O75953 348 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 PTGER3P43115 390 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 OR1G1P47890 313 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 CCR3P51677 355 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 CLCN7P51798 805 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 KPNA1P52294 538 aaPredicted RBP12.09□□□□□ -0.47
NPC1-202ENST00000540608 PLIN5Q00G26 463 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 GSTM4Q03013 218 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 ATP1A4Q13733 1029 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 GTF2H2Q13888 395 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 IMPG1Q17R60 797 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 CLLU1OSQ5K130 101 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 GTF2H2CQ6P1K8 395 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 ZBTB46Q86UZ6 589 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 GALNT13Q8IUC8 556 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 ZNF548Q8NEK5 533 aaPredicted RBP12.09□□□□□ -0.47
NPC1-202ENST00000540608 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 OR10A6Q8NH74 314 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 GIPC2Q8TF65 315 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 SLC13A3Q8WWT9 602 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 GTF2H4Q92759 462 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 MUL1Q969V5 352 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 SLC47A1Q96FL8 570 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 PPP3R2Q96LZ3 170 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 CCDC138Q96M89 665 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 HBEGFQ99075 208 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 ZBTB18Q99592 522 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 SPON2Q9BUD6 331 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 THUMPD3Q9BV44 507 aaKnown RBP12.09□□□□□ -0.47
NPC1-202ENST00000540608 FUNDC2Q9BWH2 189 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 SARS2Q9NP81 518 aaKnown RBP12.09□□□□□ -0.47
NPC1-202ENST00000540608 SELENONQ9NZV5 590 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 CCL27Q9Y4X3 112 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 TMEM189-UBE2V1I3L0A0 370 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 GNGT2O14610 69 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 NOBOXO60393 691 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 BCAS1O75363 584 aaPredicted RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 OTCP00480 354 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 CNPP09543 421 aaKnown RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 MSH3P20585 1137 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 PIGAP37287 484 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 DSC1Q08554 894 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 ITGADQ13349 1161 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 TRIM71Q2Q1W2 868 aaKnown RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 CTU2Q2VPK5 515 aaKnown RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 C18orf21Q32NC0 220 aaPredicted RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 VARS2Q5ST30 1063 aaKnown RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 CRTC3Q6UUV7 619 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 FRA10AC1Q70Z53 315 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 ABHD11Q8NFV4 315 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 EXOC2Q96KP1 924 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 RETREG1Q9H6L5 497 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 ACTR8Q9H981 624 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 LTB4R2Q9NPC1 389 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 EVLQ9UI08 416 aaPredicted RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 DHRS7Q9Y394 339 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 ELOVL7A1L3X0 281 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 ANKRD66B4E2M5 251 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 STX7O15400 261 aaKnown RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 SEPT4O43236 478 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 SERPINB7O75635 380 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 SCELO95171 688 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 SLC2A4P14672 509 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 SLC6A4P31645 630 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 AKT1P31749 480 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 KCNQ1P51787 676 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 OXCT1P55809 520 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 ISL1P61371 349 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 CYP4F3Q08477 520 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 CD47Q08722 323 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 KCNAB2Q13303 367 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 SPCS2Q15005 226 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 DPY19L1Q2PZI1 675 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 MFSD14CQ5VZR4 134 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 LAIR2Q6ISS4 152 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 GLB1LQ6UWU2 654 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 SLC16A12Q6ZSM3 486 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 MILR1Q7Z6M3 343 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 HS3ST5Q8IZT8 346 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 ZNF347Q96SE7 839 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 SH3GL1Q99961 368 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 CCSER2Q9H7U1 834 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 BPIFA1Q9NP55 256 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 WARS2Q9UGM6 360 aaKnown RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 BAG5Q9UL15 447 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 DOLKQ9UPQ8 538 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 NOD1Q9Y239 953 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 EIF3LQ9Y262 564 aaKnown RBP12.08□□□□□ -0.48
NPC1-202ENST00000540608 RAI2Q9Y5P3 530 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 CHD5Q8TDI0 1954 aa12.08□□□□□ -0.48
NPC1-202ENST00000540608 LOC100130705A0A1B0GUX0 176 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 IQCF5A8MTL0 148 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 H7C0S8 307 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 F11P03951 625 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ITIH1P19827 911 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms