RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 LINGO1Q96FE5 620 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 MED4Q9NPJ6 270 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 IGSF5Q9NSI5 407 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TRNAU1APQ9NX07 287 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PCDHGA5Q9Y5G8 931 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 KLHL33A6NCF5 533 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CSF2P04141 144 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 BRAFP15056 766 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 AK4P27144 223 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 HOXD12P35452 270 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CTSKP43235 329 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 BLKP51451 505 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CTBSQ01459 385 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 GPS2Q13227 327 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 HSP90B2PQ58FF3 399 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PLA2G2CQ5R387 149 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PIWIL4Q7Z3Z4 852 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 GLMNQ92990 594 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 APOPT1Q96IL0 206 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 GPR78Q96P69 363 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 RUVBL2Q9Y230 463 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SNX11Q9Y5W9 270 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 COPEO14579 308 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TYROBPO43914 113 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 KCNJ13O60928 360 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 KLHL2O95198 593 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 LTA4HP09960 611 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ZNF806P0C7X5 589 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CBSLP0DN79 551 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 COL6A2P12110 1019 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 NME1P15531 152 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 JUNDP17535 347 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 VCLP18206 1134 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CBSP35520 551 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DPP6P42658 865 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 RGS4P49798 205 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 LRP8Q14114 963 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DUOXA1Q1HG43 343 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 METRNLQ641Q3 311 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CYHR1Q6ZMK1 362 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 NRROSQ86YC3 692 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ALKBH8Q96BT7 664 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PDLIM5Q96HC4 596 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 OSGEPL1Q9H4B0 414 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 MKS1Q9NXB0 559 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 APOBEC3BQ9UH17 382 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 IKZF3Q9UKT9 509 aa18.53■□□□□ 0.56
TNFRSF1A-213ENST00000540022 EIF3FO00303 357 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ZBTB14O43829 449 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CELA2BP08218 269 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ENO3P13929 434 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CD1DP15813 335 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CRHR1P34998 444 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 GLRBP48167 497 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CCT5P48643 541 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PLOD1Q02809 727 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 RPA4Q13156 261 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PUM1Q14671 1186 aaKnown RBP eCLIP18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SF3A2Q15428 464 aaKnown RBP18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SLC22A15Q8IZD6 547 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 GPBAR1Q8TDU6 330 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 LRRC61Q9BV99 259 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DERL2Q9GZP9 239 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 OR52A5Q9H2C5 316 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 C12orf65Q9H3J6 166 aaKnown RBP18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SSU72Q9NP77 194 aaKnown RBP18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TMEM216Q9P0N5 145 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DCDC2Q9UHG0 476 aa18.52■□□□□ 0.56
TNFRSF1A-213ENST00000540022 H3BM21 787 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 GDF9O60383 454 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 GLRA3O75311 464 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CFIP05156 583 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CTSEP14091 401 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 RPL10P27635 214 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 HPDP32754 393 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ACTR1BP42025 376 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CLCNKAP51800 687 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ACTR1AP61163 376 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ILF3Q12906 894 aaKnown RBP eCLIP18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 C1orf61Q13536 156 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 MPP2Q14168 576 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 FAM83EQ2M2I3 478 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TRIM61Q5EBN2 209 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 AGAP9Q5VTM2 703 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 C16orf46Q6P387 395 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 MYO1HQ8N1T3 1032 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SPDYE1Q8NFV5 336 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 DPEP2Q9H4A9 486 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ERVMER34-1Q9H9K5 563 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CAPN10Q9HC96 672 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PSMD13Q9UNM6 376 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ADAMTS9Q9P2N4 1935 aa18.51■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CDC7O00311 574 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 GSTA1P08263 222 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 MPC1LP0DKB6 136 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TFEBP19484 476 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 IDSP22304 550 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 IRX4P78413 519 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SEPT7Q16181 437 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TSNAXIP1Q2TAA8 658 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms