RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CDKN1CP49918 316 aaPredicted RBP21.64■■□□□ 1.05
SCARB1-206ENST00000539320 NFKB2Q00653 900 aa21.64■■□□□ 1.05
SCARB1-206ENST00000539320 CACNG1Q06432 222 aa21.64■■□□□ 1.05
SCARB1-206ENST00000539320 KRT33BQ14525 404 aa21.64■■□□□ 1.05
SCARB1-206ENST00000539320 CRTC2Q53ET0 693 aaPredicted RBP21.64■■□□□ 1.05
SCARB1-206ENST00000539320 TAS2R42Q7RTR8 314 aa21.64■■□□□ 1.05
SCARB1-206ENST00000539320 RNF10Q8N5U6 811 aaKnown RBP21.64■■□□□ 1.05
SCARB1-206ENST00000539320 TSGA10Q9BZW7 698 aa21.64■■□□□ 1.05
SCARB1-206ENST00000539320 TUBD1Q9UJT1 453 aa21.64■■□□□ 1.05
SCARB1-206ENST00000539320 OR6C74A6NCV1 312 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 TIAF1O95411 115 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 MT-ND3P03897 115 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 F8A1P23610 371 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 ARCN1P48444 511 aaKnown RBP21.63■■□□□ 1.05
SCARB1-206ENST00000539320 ATP1A1-AS1Q5TC04 95 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 C16orf46Q6P387 395 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 CERS6Q6ZMG9 384 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 LINC00523Q86TU6 105 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 CARFQ8N187 725 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 ACVR1CQ8NER5 493 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 CDKN2AIPNLQ96HQ2 116 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 FCRL4Q96PJ5 515 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 ALS2CR12Q96Q35 445 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 FRMD8P1Q9BZ68 369 aaPredicted RBP21.63■■□□□ 1.05
SCARB1-206ENST00000539320 FGF21Q9NSA1 209 aa21.63■■□□□ 1.05
SCARB1-206ENST00000539320 PYCARD-AS1I3L0S3 204 aa21.62■■□□□ 1.05
SCARB1-206ENST00000539320 IFRD1O00458 451 aaPredicted RBP21.62■■□□□ 1.05
SCARB1-206ENST00000539320 TERTO14746 1132 aaKnown RBP21.62■■□□□ 1.05
SCARB1-206ENST00000539320 ZBTB11O95625 1053 aaPredicted RBP21.62■■□□□ 1.05
SCARB1-206ENST00000539320 KPNA2P52292 529 aaKnown RBP21.62■■□□□ 1.05
SCARB1-206ENST00000539320 HSD11B2P80365 405 aa21.62■■□□□ 1.05
SCARB1-206ENST00000539320 PRKAA1Q13131 559 aa21.62■■□□□ 1.05
SCARB1-206ENST00000539320 DBN1Q16643 649 aa21.62■■□□□ 1.05
SCARB1-206ENST00000539320 DEFB109BQ30KR1 87 aa21.62■■□□□ 1.05
SCARB1-206ENST00000539320 ZNF658BQ4V348 819 aaPredicted RBP21.62■■□□□ 1.05
SCARB1-206ENST00000539320 PIANPQ8IYJ0 282 aa21.62■■□□□ 1.05
SCARB1-206ENST00000539320 D2HGDHQ8N465 521 aa21.62■■□□□ 1.05
SCARB1-206ENST00000539320 OR52A5Q9H2C5 316 aa21.62■■□□□ 1.05
SCARB1-206ENST00000539320 POMT2Q9UKY4 750 aa21.62■■□□□ 1.05
SCARB1-206ENST00000539320 CCDC78A2IDD5 438 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 ERI2A8K979 691 aaKnown RBP21.61■■□□□ 1.05
SCARB1-206ENST00000539320 LIASO43766 372 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 AP2A2O94973 939 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 GSTM1P09488 218 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 CCNYL3P0C7X3 344 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 PSMA3P25788 255 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 STIP1P31948 543 aaKnown RBP21.61■■□□□ 1.05
SCARB1-206ENST00000539320 GSTM4Q03013 218 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 RPA4Q13156 261 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 DNASE1L3Q13609 305 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 ITIH4Q14624 930 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 OASLQ15646 514 aaKnown RBP21.61■■□□□ 1.05
SCARB1-206ENST00000539320 PWWP2BQ6NUJ5 590 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 ATG14Q6ZNE5 492 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 BPHLQ86WA6 291 aaPredicted RBP21.61■■□□□ 1.05
SCARB1-206ENST00000539320 OR52K1Q8NGK4 314 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 LHX9Q9NQ69 397 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 SOHLH2Q9NX45 425 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 KCND3Q9UK17 655 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 PADI1Q9ULC6 663 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 GUCA1BQ9UMX6 200 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 BTRCQ9Y297 605 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 PCDHB3Q9Y5E6 796 aa21.61■■□□□ 1.05
SCARB1-206ENST00000539320 MROH6A6NGR9 719 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 MATN2O00339 956 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 KRT86O43790 486 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 IFNB1P01574 187 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 POLR2CP19387 275 aaPredicted RBP21.6■■□□□ 1.05
SCARB1-206ENST00000539320 MSNP26038 577 aaKnown RBP21.6■■□□□ 1.05
SCARB1-206ENST00000539320 FDFT1P37268 417 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 PREPP48147 710 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 CD151P48509 253 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 TUBB4BP68371 445 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 CDH17Q12864 832 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 TUBB2AQ13885 445 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 ZNF449Q6P9G9 518 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 SLC13A5Q86YT5 568 aaPredicted RBP21.6■■□□□ 1.05
SCARB1-206ENST00000539320 CLDN19Q8N6F1 224 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 DNAAF3Q8N9W5 541 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 OR4E2Q8NGC2 313 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 CT55Q8WUE5 264 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 APOBEC4Q8WW27 367 aaKnown RBP21.6■■□□□ 1.05
SCARB1-206ENST00000539320 LCN9Q8WX39 176 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 PPM1MQ96MI6 270 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 FERD3LQ96RJ6 166 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 TUBB2BQ9BVA1 445 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 TRIM4Q9C037 500 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 SRMSQ9H3Y6 488 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 SMARCAL1Q9NZC9 954 aa21.6■■□□□ 1.05
SCARB1-206ENST00000539320 QSOX1O00391 747 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 KATNA1O75449 491 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 GAS8O95995 478 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 CDH3P22223 829 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 FOXN2P32314 431 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 NSG1P42857 185 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 GSDMDP57764 484 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 SKIDA1Q1XH10 827 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 CCDC38Q502W7 563 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 TMTC4Q5T4D3 741 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 FBXO38Q6PIJ6 1188 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms