RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 CNTN1Q12860 1018 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 MPP3Q13368 585 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 TRIM25Q14258 630 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SIX1Q15475 284 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 OASLQ15646 514 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 CYP1B1Q16678 543 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PARP6Q2NL67 630 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF528Q3MIS6 628 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ERAP2Q6P179 960 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 C4orf22Q6V702 233 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SLC36A4Q6YBV0 504 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 KDM7AQ6ZMT4 941 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ERN2Q76MJ5 926 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 CCDC91Q7Z6B0 441 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 LINC00523Q86TU6 105 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 TTC7BQ86TV6 843 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 CAMK1DQ8IU85 385 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 KRTAP1-3Q8IUG1 177 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 KLHL7Q8IXQ5 586 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 IFT20Q8IY31 132 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 CNPY4Q8N129 248 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 MREGQ8N565 214 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 AADATQ8N5Z0 425 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PRELID2Q8N945 189 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PLA2G15Q8NCC3 412 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 IPMKQ8NFU5 416 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 OR14K1Q8NGZ2 314 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 OR14C36Q8NHC7 312 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 HCAR2Q8TDS4 363 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SNX19Q92543 992 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RAB7BQ96AH8 199 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RMDN1Q96DB5 314 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RTP4Q96DX8 246 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 IMP4Q96G21 291 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF419Q96HQ0 510 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 TEKT5Q96M29 485 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 KLHL32Q96NJ5 620 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 LMF1Q96S06 567 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RBM15Q96T37 977 aaKnown RBP eCLIP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 MYCBPQ99417 103 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SOX7Q9BT81 388 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 TRIM8Q9BZR9 551 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 BTBD1Q9H0C5 482 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 DDX47Q9H0S4 455 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SLC25A51Q9H1U9 297 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 C10orf88Q9H8K7 445 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 LRRC40Q9H9A6 602 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SEC61A2Q9H9S3 476 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 USP29Q9HBJ7 922 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SGK2Q9HBY8 427 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 GLOD4Q9HC38 313 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PCDH9Q9HC56 1237 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 CD248Q9HCU0 757 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 VPS45Q9NRW7 570 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ZSCAN32Q9NX65 697 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PPP4R1LQ9P1A2 415 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PAK5Q9P286 719 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 DKK3Q9UBP4 350 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ASIC3Q9UHC3 531 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 FAM153AQ9UHL3 310 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RAPGEFL1Q9UHV5 662 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SARDHQ9UL12 918 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RAB23Q9ULC3 237 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RPL26L1Q9UNX3 145 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 DRG1Q9Y295 367 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 AAR2Q9Y312 384 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PCDHGA2Q9Y5H1 932 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RAI2Q9Y5P3 530 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 FAM169AQ9Y6X4 670 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ARID1BQ8NFD5 2236 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 TTC28Q96AY4 2481 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 XIRP2A4UGR9 3374 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 hCG_2014768A0A024R1R8 64 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TBC1D3DA0A087WVF3 549 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TBC1D3IA0A087WXS9 549 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TBC1D3EA0A087X179 549 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TBC1D3KA0A087X1G2 549 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TSPAN11A1L157 253 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TBC1D3FA6NER0 549 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 GOLGA6L10A6NI86 522 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 MEI4A8MW99 385 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 HMGB1P1B2RPK0 211 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TBC1D3LB9A6J9 549 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PLK4O00444 970 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TRAFD1O14545 582 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 NDUFAB1O14561 156 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 NDC80O14777 642 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PSMD3O43242 534 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TSPAN6O43657 245 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 NRP2O60462 931 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 FOXD2O60548 495 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 KATNA1O75449 491 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PGLSO95336 258 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 SEMA4FO95754 770 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 NDST3O95803 873 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 MT-CYBP00156 380 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 EPOP01588 193 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 IGLV3-19P01714 112 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 KRT14P02533 472 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms