RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 NHSQ6T4R5 1651 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MGAT4DA6NG13 374 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 AGAP5A6NIR3 686 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 STAU1O95793 577 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CRHBPP24387 322 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CXCR2P25025 360 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MRPL19P49406 292 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ADIGQ0VDE8 80 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 PRKG2Q13237 762 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SV2CQ496J9 727 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 HSF5Q4G112 596 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 GNASQ5JWF2 1037 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CDC73Q6P1J9 531 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CCBE1Q6UXH8 406 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 RASAL3Q86YV0 1011 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 GPR65Q8IYL9 337 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MFSD4AQ8N468 514 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF671Q8TAW3 534 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 LENG9Q96B70 501 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MAGEB10Q96LZ2 347 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MRPL45Q9BRJ2 306 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TRIM62Q9BVG3 475 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CHRAC1Q9NRG0 131 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 PTGFRNQ9P2B2 879 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TRAPPC4Q9Y296 219 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 hCG_2039718K7EN88 272 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ZBTB14O43829 449 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 IPO13O94829 963 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MATN4O95460 622 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 DHFRP00374 187 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 FABP3P05413 133 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF806P0C7X5 589 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SDC2P34741 201 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ETV6P41212 452 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MAP2K4P45985 399 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TAF6P49848 677 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 DEFA5Q01523 94 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TEKQ02763 1124 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PTSQ03393 145 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SMARCB1Q12824 385 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 CNTN1Q12860 1018 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SF3B4Q15427 424 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TXNDC5Q8NBS9 432 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 RHOJQ9H4E5 214 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PRMT7Q9NVM4 692 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TIMM22Q9Y584 194 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PCDHGB2Q9Y5G2 931 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 NAV1Q8NEY1 1877 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 UBE2QL1A1L167 161 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 FABP12A6NFH5 140 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MANSC4A6NHS7 340 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 RRN3P2A6NIE6 340 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MEIS2O14770 477 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 LRCH4O75427 683 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ICAM1P05362 532 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SUPT20HL2P0C7V6 817 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 RAP2AP10114 183 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ICAM3P32942 547 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SCNN1AP37088 669 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 OR3A3P47888 321 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 WSCD2Q2TBF2 565 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 HSDL1Q3SXM5 330 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 CYBRD1Q53TN4 286 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 C6orf141Q5SZD1 244 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 R3HCC1LQ7Z5L2 792 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 C14orf80Q86SX3 495 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 RAVER1Q8IY67 606 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SNED1Q8TER0 1413 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 UBXN10Q96LJ8 280 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MUC3BQ9H195 1237 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SH3BP4Q9P0V3 963 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 NFKBIL1Q9UBC1 381 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 RPS6KA6Q9UK32 745 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 HSPB11Q9Y547 144 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PIP5K1BO14986 540 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ENDOD1O94919 500 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ATF6P18850 670 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ARSFP54793 590 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MTPNP58546 118 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MS4A2Q01362 244 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 GARNL3Q5VVW2 1013 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 OVOS1Q6IE37 1185 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ADCK2Q7Z695 626 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 NOXA1Q86UR1 476 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 XYLT1Q86Y38 959 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 IGDCC3Q8IVU1 814 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 CARNMT1Q8N4J0 409 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 LHFPL5Q8TAF8 219 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PHOX2BQ99453 314 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SLC29A1Q99808 456 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ITPAQ9BY32 194 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 KCNN2Q9H2S1 579 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PRDM12Q9H4Q4 367 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 CYP3A43Q9HB55 503 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 C3orf14Q9HBI5 128 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TMEM138Q9NPI0 162 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PCDHGA7Q9Y5G6 932 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 A0A0G2JPF8 293 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MOXD2PA6NHM9 499 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms