RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 MED21Q13503 144 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 KCNC3Q14003 757 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 ATP13A5Q4VNC0 1218 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.27
SMG6-203ENST00000536871 LETMD1Q6P1Q0 360 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 IL27RAQ6UWB1 636 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 Q6ZVU0 165 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 NRSN1Q8IZ57 195 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 GLB1L3Q8NCI6 653 aaPredicted RBP13.33□□□□□ -0.27
SMG6-203ENST00000536871 OR4F6Q8NGB9 312 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 OR9I1Q8NGQ6 314 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 LRRC58Q96CX6 371 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 TRAPPC9Q96Q05 1148 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 NSUN3Q9H649 340 aaKnown RBP13.33□□□□□ -0.27
SMG6-203ENST00000536871 PARVBQ9HBI1 364 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 ASIC5Q9NY37 505 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 CXXC1Q9P0U4 656 aaPredicted RBP13.33□□□□□ -0.27
SMG6-203ENST00000536871 PDP2Q9P2J9 529 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 SLCO3A1Q9UIG8 710 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 EIF3LQ9Y262 564 aaKnown RBP13.33□□□□□ -0.27
SMG6-203ENST00000536871 SLC27A6Q9Y2P4 619 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 AP3M1Q9Y2T2 418 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 MRPS23Q9Y3D9 190 aaKnown RBP13.33□□□□□ -0.27
SMG6-203ENST00000536871 AP4S1Q9Y587 144 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 A0A0U1RQS6 177 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 LINC01553A4QN01 128 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 PRORSD1PA6NEY8 169 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 OR7A17O14581 309 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 GPR39O43194 453 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 BNIP3LO60238 219 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 KRT6AP02538 564 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 KRT6BP04259 564 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 CAPN3P20807 821 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 PRDX3P30048 256 aaKnown RBP13.33□□□□□ -0.28
SMG6-203ENST00000536871 KRT6CP48668 564 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 CCR3P51677 355 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 SLC7A2P52569 658 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 INPP5AQ14642 412 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 ZNF284Q2VY69 593 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 GRAMD1BQ3KR37 738 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 VPS26BQ4G0F5 336 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 GGTA1PQ4G0N0 100 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 ZNF805Q5CZA5 627 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 LDLRAP1Q5SW96 308 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 ERAP2Q6P179 960 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 SPNS2Q8IVW8 549 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 KBTBD2Q8IY47 623 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 DPP10Q8N608 796 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 OR52B6Q8NGF0 335 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 LKAAEAR1Q8TD35 194 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 FRS2Q8WU20 508 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 ZBTB18Q99592 522 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 LBHD1Q9BQE6 289 aaPredicted RBP13.33□□□□□ -0.28
SMG6-203ENST00000536871 FAM83CQ9BQN1 747 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 APOL5Q9BWW9 433 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 SLC32A1Q9H598 525 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 C8orf4Q9NR00 106 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 MAP10Q9P2G4 905 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 IL36AQ9UHA7 158 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 RAB26Q9ULW5 256 aa13.33□□□□□ -0.28
SMG6-203ENST00000536871 PTPRSQ13332 1948 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 ENO4A6NNW6 628 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 ARNTLO00327 626 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 TAPBPO15533 448 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 PAPLNO95428 1278 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 ITGB6P18564 788 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 JAK1P23458 1154 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 PEX2P28328 305 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 HSPA7P48741 367 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 RPIAP49247 311 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 DGKGP49619 791 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 EEFSECP57772 596 aaKnown RBP13.32□□□□□ -0.28
SMG6-203ENST00000536871 MAP7Q14244 749 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 NR6A1Q15406 480 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 RNF111Q6ZNA4 994 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 Q6ZSR9 355 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 DPPA4Q7L190 304 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 TRIM46Q7Z4K8 759 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 DDHD1Q8NEL9 900 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 OR2T34Q8NGX1 318 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 OR2T3Q8NH03 318 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 DNAJB8Q8NHS0 232 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 OSCP1Q8WVF1 389 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 ASZ1Q8WWH4 475 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 GATA6Q92908 595 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 POP5Q969H6 163 aaKnown RBP13.32□□□□□ -0.28
SMG6-203ENST00000536871 VPS35Q96QK1 796 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 SPATA16Q9BXB7 569 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 SLC52A3Q9NQ40 469 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 CHCHD3Q9NX63 227 aaKnown RBP13.32□□□□□ -0.28
SMG6-203ENST00000536871 ACTR3BQ9P1U1 418 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 RIMS3Q9UJD0 308 aa13.32□□□□□ -0.28
SMG6-203ENST00000536871 A0A1B0GTL3 188 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
SMG6-203ENST00000536871 ULK1O75385 1050 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 AKT1P31749 480 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 MAGEA8P43361 318 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 DIO3P55073 304 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 NFYCQ13952 458 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 EIF4HQ15056 248 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms