RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 QSOX1O00391 747 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 PSMD3O43242 534 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 CREG1O75629 220 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 RFPL1O75677 317 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 POLBP06746 335 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 EBLN1P0CF75 366 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 FOLR1P15328 257 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 MC4RP32245 332 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 CASRP41180 1078 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 PPP1CAP62136 330 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 RPS15P62841 145 aaKnown RBP12.79□□□□□ -0.36
RTN3-207ENST00000536011 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 KCNAB1Q14722 419 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 CAPRIN2Q6IMN6 1127 aaKnown RBP12.79□□□□□ -0.36
RTN3-207ENST00000536011 PWWP2BQ6NUJ5 590 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 DUS1LQ6P1R4 473 aaKnown RBP12.79□□□□□ -0.36
RTN3-207ENST00000536011 TMEM126BQ8IUX1 230 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 LRRC57Q8N9N7 239 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 ACVR1CQ8NER5 493 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 OR13C4Q8NGS5 318 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 CT55Q8WUE5 264 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 LCN9Q8WX39 176 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 ALG3Q92685 438 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 ABHD17AQ96GS6 310 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 RMDN2Q96LZ7 410 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 FAM118BQ9BPY3 351 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 SYTL2Q9HCH5 934 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 LATS2Q9NRM7 1088 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 ZDHHC3Q9NYG2 299 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 BTRCQ9Y297 605 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 MAN2B2Q9Y2E5 1009 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 MRPS18BQ9Y676 258 aaKnown RBP12.79□□□□□ -0.36
RTN3-207ENST00000536011 KCNMB2Q9Y691 235 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 DUSP10Q9Y6W6 482 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 IGLV3-16A0A075B6K0 115 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 GRID2IPA4D2P6 1211 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 F8W8V4 182 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 H7C0S8 307 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 SCRG1O75711 98 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 GAS8O95995 478 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 CDH3P22223 829 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 F8A1P23610 371 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 ACRV1P26436 265 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 CA5AP35218 305 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 CD151P48509 253 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 PMS2P54278 862 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 GSDMDP57764 484 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 TMPRSS15P98073 1019 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 RPA4Q13156 261 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 OLIG2Q13516 323 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 ZRANB3Q5FWF4 1079 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 ATP1A1-AS1Q5TC04 95 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 DENND5AQ6IQ26 1287 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 KLHDC8BQ8IXV7 354 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 THAP4Q8WY91 577 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 DNAJC1Q96KC8 554 aaKnown RBP12.78□□□□□ -0.36
RTN3-207ENST00000536011 BAG1Q99933 345 aaPredicted RBP12.78□□□□□ -0.36
RTN3-207ENST00000536011 LACRTQ9GZZ8 138 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 EPN3Q9H201 632 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 SRMSQ9H3Y6 488 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 ACTL8Q9H568 366 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 MVB12BQ9H7P6 319 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 COG4Q9H9E3 785 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 ZNF71Q9NQZ8 489 aaPredicted RBP12.78□□□□□ -0.36
RTN3-207ENST00000536011 C1GALT1Q9NS00 363 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 KCND1Q9NSA2 647 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 NLE1Q9NVX2 485 aaPredicted RBP12.78□□□□□ -0.36
RTN3-207ENST00000536011 POMT2Q9UKY4 750 aa12.78□□□□□ -0.36
RTN3-207ENST00000536011 GSAPA4D1B5 854 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 CDC14CA4D256 554 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 ARHGAP6O43182 974 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 LDB2O43679 373 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 SGTAO43765 313 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 AP2A2O94973 939 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 TIAF1O95411 115 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 KLK3P07288 261 aaPredicted RBP12.77□□□□□ -0.37
RTN3-207ENST00000536011 CACNG1Q06432 222 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 KLRB1Q12918 225 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 MSLNQ13421 630 aaPredicted RBP12.77□□□□□ -0.37
RTN3-207ENST00000536011 LAMB3Q13751 1172 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 SPARCL1Q14515 664 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 TCTN3Q6NUS6 607 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 RAD9BQ6WBX8 426 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 TAS2R42Q7RTR8 314 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 SYVN1Q86TM6 617 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 LINC00523Q86TU6 105 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 SERPINA9Q86WD7 417 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 FAM71DQ8N9W8 422 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 ACRBPQ8NEB7 543 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 OR4E2Q8NGC2 313 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 STYXQ8WUJ0 223 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 CPT1BQ92523 772 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.77□□□□□ -0.37
RTN3-207ENST00000536011 FERD3LQ96RJ6 166 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 FAM96AQ9H5X1 160 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 REXO2Q9Y3B8 237 aaKnown RBP12.77□□□□□ -0.37
RTN3-207ENST00000536011 HECTD1Q9ULT8 2610 aa12.77□□□□□ -0.37
RTN3-207ENST00000536011 FLNCQ14315 2725 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 TRBV5-4A0A0C4DH59 114 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms