RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PFDN6O15212 129 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 UBXN7O94888 489 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 F7P08709 466 aaPredicted RBP22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 TYRP1P17643 537 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 ACADLP28330 430 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 FMO4P31512 558 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 SLC1A2P43004 574 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 LIMK2P53671 638 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 PLOD1Q02809 727 aaPredicted RBP22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 CTBP1Q13363 440 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 HSP90AA5PQ58FG0 334 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 STEAP4Q687X5 459 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 TMEM71Q6P5X7 295 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 WDR74Q6RFH5 385 aaPredicted RBP22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 UNC5AQ6ZN44 842 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 PDZD3Q86UT5 571 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 KCNMB4Q86W47 210 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 LMNTD2Q8IXW0 634 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 CALML6Q8TD86 181 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 ZFPM2Q8WW38 1151 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 NCSTNQ92542 709 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 LRRC1Q9BTT6 524 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 PDP2Q9P2J9 529 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 ZC3H7BQ9UGR2 993 aaKnown RBP22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 FBXO5Q9UKT4 447 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 CDYLQ9Y232 598 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 CRYL1Q9Y2S2 319 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 HEBP2Q9Y5Z4 205 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 CCDC187A0A096LP49 1063 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 PMS2P1A4D2B8 440 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 IFRD1O00458 451 aaPredicted RBP22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 GPC4O75487 556 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 ESR1P03372 595 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 MPOP05164 745 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 PROS1P07225 676 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 ERVK-10P10266 1014 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 AOAHP28039 575 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 LSSP48449 732 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 SLC7A5Q01650 507 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 CYP4F3Q08477 520 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 PDIA2Q13087 525 aaKnown RBP22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 FASTKD3Q14CZ7 662 aaKnown RBP22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 TRADDQ15628 312 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 SYTL3Q4VX76 610 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 PHF19Q5T6S3 580 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 C8orf74Q6P047 294 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 ANKMY2Q8IV38 441 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 MMGT1Q8N4V1 131 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 MNS1Q8NEH6 495 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 JPH3Q8WXH2 748 aaPredicted RBP22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 ART4Q93070 314 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 CFAP36Q96G28 342 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 PRR11Q96HE9 360 aaPredicted RBP22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 CCDC74BQ96LY2 380 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 PANX3Q96QZ0 392 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 FAM167BQ9BTA0 163 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 STRADBQ9C0K7 418 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 KIR3DX1Q9H7L2 352 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 POLR1BQ9H9Y6 1135 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 FBXO6Q9NRD1 293 aaPredicted RBP22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 IARS2Q9NSE4 1012 aaKnown RBP22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 SATB2Q9UPW6 733 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 VPS9D1Q9Y2B5 631 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 COLEC10Q9Y6Z7 277 aa22.17■■□□□ 1.14
SFSWAP-204ENST00000535399 H3BMM5 538 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 THRAP10827 490 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 AMD1P17707 334 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 MPSTP25325 297 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 NDUFS1P28331 727 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 PPM1FP49593 454 aaPredicted RBP22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 CSE1LP55060 971 aaKnown RBP22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 GABREP78334 506 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 C3orf38Q5JPI3 329 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 ZDHHC24Q6UX98 284 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 VRK3Q8IV63 474 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 NOA1Q8NC60 698 aaKnown RBP22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 PHC3Q8NDX5 983 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 WDR36Q8NI36 951 aaKnown RBP22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 MDM1Q8TC05 714 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 RSC1A1Q92681 617 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 TFGQ92734 400 aaPredicted RBP22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 TMEM159Q96B96 161 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 FERD3LQ96RJ6 166 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 CCDC86Q9H6F5 360 aaKnown RBP22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 DKK4Q9UBT3 224 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 SLC24A2Q9UI40 661 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 PIKFYVEQ9Y2I7 2098 aa22.16■■□□□ 1.14
SFSWAP-204ENST00000535399 FREM2Q5SZK8 3169 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 TMEM8BA6NDV4 472 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 NIPSNAP2O75323 286 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 SLCO2B1O94956 709 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 PKMP14618 531 aaKnown RBP22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 MPP1Q00013 466 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 HSPA14Q0VDF9 509 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 TRA2AQ13595 282 aaKnown RBP eCLIP22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 FRG1Q14331 258 aaKnown RBP22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 C16orf72Q14CZ0 275 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 TRMT10BQ6PF06 316 aaKnown RBP22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 CNTN4Q8IWV2 1026 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 SLC22A15Q8IZD6 547 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms