RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 C1QTNF8P60827 252 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 DBF4BQ8NFT6 615 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 GPR88Q9GZN0 384 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 COMMD4Q9H0A8 199 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 EIF2B4Q9UI10 523 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 MAP2P11137 1827 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 DNAJA2O60884 412 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 PRKD1Q15139 912 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 ZNF311Q5JNZ3 666 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 NKD2Q969F2 451 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 PRICKLE1Q96MT3 831 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 TRIM39Q9HCM9 518 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 POLR3BQ9NW08 1133 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 ALOX5P09917 674 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 AHCYP23526 432 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 CRY2Q49AN0 593 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 CARD16Q5EG05 197 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 ARL13AQ5H913 290 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 AMZ2Q86W34 360 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 OR4C6Q8NH72 309 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 NUS1Q96E22 293 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 FGFBP2Q9BYJ0 223 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 SIRPGQ9P1W8 387 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 RGS17Q9UGC6 210 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 COMMD3-BMI1R4GMX3 469 aa17.92■□□□□ 0.46
SFSWAP-203ENST00000535236 SLC30A4O14863 429 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 PI15O43692 258 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 SETD6Q8TBK2 473 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 NME6O75414 186 aaPredicted RBP17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 PSMA1P25786 263 aaKnown RBP17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 DGKEP52429 567 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 CDH12P55289 794 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 GDF6Q6KF10 455 aaPredicted RBP17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 GSDMCQ9BYG8 508 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 PEX10O60683 326 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 NOS1APO75052 506 aaPredicted RBP17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 PCSK2P16519 638 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 MC1RQ01726 317 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 FPGSQ05932 587 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 EIPR1Q53HC9 387 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 C7orf26Q96N11 449 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 CIB1Q99828 191 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 DPYSL5Q9BPU6 564 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 SNHG28P0DPA3 235 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 IL7RP16871 459 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 CASRP41180 1078 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 GPM6BQ13491 265 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 SLC1A5Q15758 541 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 ANKRD46Q86W74 232 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 C4orf32Q8N8J7 132 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 ALG2Q9H553 416 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 S100A14Q9HCY8 104 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 ZNF180Q9UJW8 692 aa17.91■□□□□ 0.46
SFSWAP-203ENST00000535236 SOWAHBA6NEL2 793 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 GATBO75879 557 aaKnown RBP17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 METTL18O95568 372 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 CD48P09326 243 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 GNAZP19086 355 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 ATP5A1P25705 553 aaKnown RBP17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 TLR1Q15399 786 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 LPCAT4Q643R3 524 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 SUN3Q8TAQ9 357 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 GPR151Q8TDV0 419 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 LPGAT1Q92604 370 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 BAZ2BQ9UIF8 2168 aaKnown RBP17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 TFECO14948 347 aaPredicted RBP17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 PAPSS2O95340 614 aaPredicted RBP17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 THRBP10828 461 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 CSKP41240 450 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 YAP1P46937 504 aaKnown RBP17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 KCTD19Q17RG1 926 aaPredicted RBP17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 SH3RF2Q8TEC5 729 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 GIPC3Q8TF64 312 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 ASB3Q9Y575 518 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 A0A075B6Q4 140 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 LRRC73Q5JTD7 316 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 TPGS2Q68CL5 300 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 ADGRG6Q86SQ4 1221 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 CNTD1Q8N815 330 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 ST6GALNAC4Q9H4F1 302 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 C2orf71A6NGG8 1288 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 LMO2P25791 158 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 ACTR1BP42025 376 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 ACTR1AP61163 376 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 GFOD2Q3B7J2 385 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 PRR23BQ6ZRT6 265 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 PGAM4Q8N0Y7 254 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 HMGB4Q8WW32 186 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 NMUR2Q9GZQ4 415 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 INTS10Q9NVR2 710 aaKnown RBP17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 C1orf109Q9NX04 203 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 CDH22Q9UJ99 828 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 RUVBL1Q9Y265 456 aaKnown RBP17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 RABGGTBP53611 331 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 SLC9B1Q4ZJI4 515 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 TMEM145Q8NBT3 493 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 SCLYQ96I15 445 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 ANKHQ9HCJ1 492 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 GRIP1Q9Y3R0 1128 aa17.9■□□□□ 0.46
SFSWAP-203ENST00000535236 NRG3P56975 720 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms