RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 PLEKHS1Q5SXH7 462 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 TMEM26Q6ZUK4 368 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 SLC22A15Q8IZD6 547 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 KRT222Q8N1A0 295 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 EIF1ADQ8N9N8 165 aaKnown RBP20.08■□□□□ 0.81
CHFR-209ENST00000535181 C9orf72Q96LT7 481 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 C12orf66Q96MD2 445 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 INSM2Q96T92 566 aaPredicted RBP20.08■□□□□ 0.81
CHFR-209ENST00000535181 SLC38A3Q99624 504 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 CCDC68Q9H2F9 335 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 LRRN3Q9H3W5 708 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 NSMCE4AQ9NXX6 385 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 CDYLQ9Y232 598 aa20.08■□□□□ 0.81
CHFR-209ENST00000535181 PTPRBP23467 1997 aa20.08■□□□□ 0.8
CHFR-209ENST00000535181 FAM221BA6H8Z2 402 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 B4GAT1O43505 415 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 NIPSNAP2O75323 286 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 AHSGP02765 367 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 RPLP0P05388 317 aaKnown RBP20.07■□□□□ 0.8
CHFR-209ENST00000535181 RHOXF2BP0C7M4 288 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 GABRB3P28472 473 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 ATP5DP30049 168 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 GPX6P59796 221 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 GBX1Q14549 363 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 HES3Q5TGS1 186 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 ZNF549Q6P9A3 640 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 CNSTQ6PJW8 725 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 C3orf62Q6ZUJ4 267 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 OTOAQ7RTW8 1153 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 CHCHD4Q8N4Q1 142 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 SPDYE1Q8NFV5 336 aaPredicted RBP20.07■□□□□ 0.8
CHFR-209ENST00000535181 RHOXF2Q9BQY4 288 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 AARSD1Q9BTE6 412 aaKnown RBP20.07■□□□□ 0.8
CHFR-209ENST00000535181 LRRC4CQ9HCJ2 640 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 IMP3Q9NV31 184 aaKnown RBP20.07■□□□□ 0.8
CHFR-209ENST00000535181 KCNK4Q9NYG8 393 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 COLEC10Q9Y6Z7 277 aa20.07■□□□□ 0.8
CHFR-209ENST00000535181 IGHV1OR21-1A0A087WYE8 117 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 TCRBV9S1A1TA0A576 114 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 ITGB6P18564 788 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 CD9P21926 228 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 ACADLP28330 430 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 OR1D5P58170 312 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 CCL7P80098 99 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 HSPA14Q0VDF9 509 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 FOXC1Q12948 553 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 SPIDRQ14159 915 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 DCBLD1Q8N8Z6 715 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 Q8N9G6 341 aaPredicted RBP20.06■□□□□ 0.8
CHFR-209ENST00000535181 CDKL2Q92772 493 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 DPYSL5Q9BPU6 564 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 MVB12BQ9H7P6 319 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 MED16Q9Y2X0 877 aa20.06■□□□□ 0.8
CHFR-209ENST00000535181 FAM159BA6NKW6 160 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 D6RAR5 112 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 E5RI56 91 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 MT-CO3P00414 261 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 C1QAP02745 245 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 F7P08709 466 aaPredicted RBP20.05■□□□□ 0.8
CHFR-209ENST00000535181 CHRM3P20309 590 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 CD1CP29017 333 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 ALDH4A1P30038 563 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 STX2P32856 288 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 CLCN7P51798 805 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 SHC2P98077 582 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 GPR18Q14330 331 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 NAPRTQ6XQN6 538 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 RBM44Q6ZP01 1051 aaKnown RBP20.05■□□□□ 0.8
CHFR-209ENST00000535181 CAPN12Q6ZSI9 719 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 OR10G6Q8NH81 332 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 TFGQ92734 400 aaPredicted RBP20.05■□□□□ 0.8
CHFR-209ENST00000535181 GRAMD1AQ96CP6 724 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 GFM1Q96RP9 751 aaKnown RBP20.05■□□□□ 0.8
CHFR-209ENST00000535181 KIR3DX1Q9H7L2 352 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 SLC17A6Q9P2U8 582 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 CLCA2Q9UQC9 943 aa20.05■□□□□ 0.8
CHFR-209ENST00000535181 CFAP20Q9Y6A4 193 aaKnown RBP20.05■□□□□ 0.8
CHFR-209ENST00000535181 DUX1O43812 170 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 HYAL3O43820 417 aaPredicted RBP20.04■□□□□ 0.8
CHFR-209ENST00000535181 CPNE6O95741 557 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 BRD3Q15059 726 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 TTLL9Q3SXZ7 439 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 TEX35Q5T0J7 233 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 ZNF761Q86XN6 746 aaPredicted RBP20.04■□□□□ 0.8
CHFR-209ENST00000535181 ZBTB2Q8N680 514 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 DEPDC7Q96QD5 511 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 MCMBPQ9BTE3 642 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 SMYD2Q9NRG4 433 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 NFU1Q9UMS0 254 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 NEUROG3Q9Y4Z2 214 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 PSAT1Q9Y617 370 aa20.04■□□□□ 0.8
CHFR-209ENST00000535181 PRAMEF33A0A0G2JMD5 474 aa20.03■□□□□ 0.8
CHFR-209ENST00000535181 MED19A0JLT2 244 aaPredicted RBP20.03■□□□□ 0.8
CHFR-209ENST00000535181 EIF3FO00303 357 aaPredicted RBP20.03■□□□□ 0.8
CHFR-209ENST00000535181 SLU7O95391 586 aaKnown RBP20.03■□□□□ 0.8
CHFR-209ENST00000535181 TNFRSF8P28908 595 aa20.03■□□□□ 0.8
CHFR-209ENST00000535181 FOXK2Q01167 660 aa20.03■□□□□ 0.8
CHFR-209ENST00000535181 NAB1Q13506 487 aa20.03■□□□□ 0.8
CHFR-209ENST00000535181 SLMAPQ14BN4 828 aa20.03■□□□□ 0.8
CHFR-209ENST00000535181 UGT3A1Q6NUS8 523 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms