RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 VANGL2Q9ULK5 521 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 POLHQ9Y253 713 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 NEU2Q9Y3R4 380 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CROCCQ5TZA2 2017 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 POLEQ07864 2286 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 SHANK1Q9Y566 2161 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ANK2Q01484 3957 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 PKDREJQ9NTG1 2253 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ANK3Q12955 4377 aaKnown RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 CSPG4Q6UVK1 2322 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 IGHV1OR21-1A0A087WYE8 117 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TYW5A2RUC4 315 aaKnown RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 GRID2IPA4D2P6 1211 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 A8MX80 341 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 F5H5T6 163 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 AREL1O15033 823 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 INSIG1O15503 277 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TEX33O43247 280 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TSPAN6O43657 245 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 AP1G1O43747 822 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 NUDT21O43809 227 aaKnown RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 CREG1O75629 220 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 GRAP2O75791 330 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ZMPSTE24O75844 475 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 WISP2O76076 250 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ADCY5O95622 1261 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 EML2O95834 649 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TRUB2O95900 331 aaKnown RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ERBB2P04626 1255 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 UGT2B4P06133 528 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 THRAP10827 490 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 CD99P14209 185 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 STAT6P42226 847 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 MAPK9P45984 424 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 PPM1FP49593 454 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 CCNHP51946 323 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 YPEL5P62699 121 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 MC1RQ01726 317 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 FOXM1Q08050 763 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 BST2Q10589 180 aaKnown RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 STK4Q13043 487 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC12A1Q13621 1099 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 IL10RAQ13651 578 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ALCAMQ13740 583 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 NFATC4Q14934 902 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 C21orf62-AS1Q17RA5 79 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 MYLK3Q32MK0 819 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM177Q53S58 311 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 LCN10Q6JVE6 187 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 DUS1LQ6P1R4 473 aaKnown RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 DENND1BQ6P3S1 775 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 C22orf39Q6P5X5 142 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC30A9Q6PML9 568 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ARHGAP22Q7Z5H3 698 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TFAP2DQ7Z6R9 452 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC47A2Q86VL8 602 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 CXorf67Q86X51 503 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 KIF18BQ86Y91 864 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 APLFQ8IW19 511 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 FDCSPQ8NFU4 85 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 OR4D9Q8NGE8 314 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 OR5M3Q8NGP4 307 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 CT55Q8WUE5 264 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC35F5Q8WV83 523 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ASB12Q8WXK4 309 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TAF4BQ92750 862 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 INPP5DQ92835 1189 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 KAT5Q92993 513 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 MAGEB5Q9BZ81 275 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC29A3Q9BZD2 475 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TM6SF2Q9BZW4 377 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ING2Q9H160 280 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ZBTB20Q9HC78 741 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TRIM39Q9HCM9 518 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ACSS2Q9NR19 701 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TAAR2Q9P1P5 351 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 COPG2Q9UBF2 871 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 KLQ9UEF7 1012 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 MCM8Q9UJA3 840 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 AJAP1Q9UKB5 411 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 HS3ST2Q9Y278 367 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM184BQ9Y519 407 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 PCDHGB6Q9Y5F9 930 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 TNPO3Q9Y5L0 923 aaKnown RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 HS3ST4Q9Y661 456 aa2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 COPG1Q9Y678 874 aaKnown RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 DIDO1Q9BTC0 2240 aaKnown RBP2.95□□□□□ -1.94
CHMP4A-208ENST00000534106 ALG1L2C9J202 215 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 O00370 1275 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 POLR1CO15160 346 aaPredicted RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 EIF3DO15371 548 aaKnown RBP eCLIP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 KIF1CO43896 1103 aaKnown RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 SRGAP2O75044 1071 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 TM7SF2O76062 418 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 KIAA0754O94854 1291 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 NR3C1P04150 777 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 RHOCP08134 193 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 COX6B1P14854 86 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 GM2AP17900 193 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 HTR1EP28566 365 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms