RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TJP1Q07157 1748 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 C10orf71Q711Q0 1435 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 C1orf232A0A0U1RR37 186 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 A0A1W2PPC1 479 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 RPS10-NUDT3A0A1W2PQS6 291 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 VWA3AA6NCI4 1184 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 KCNJ18B7U540 433 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 MCIDASD6RGH6 385 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 PLOD2O00469 737 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 RPP40O75818 363 aaKnown RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 IFNA14P01570 189 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 CD4P01730 458 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 RETP07949 1114 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 PCNAP12004 261 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 HOXB2P14652 356 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 GLULP15104 373 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 GAP43P17677 238 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 MUTP22033 750 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 CTNNA2P26232 953 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 SERPINB3P29508 390 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 PKLRP30613 574 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 CTNNA1P35221 906 aaKnown RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 GPD2P43304 727 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 RFX2P48378 723 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 RCAN1P53805 252 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 FOXL2P58012 376 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 EGR4Q05215 589 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 RAD51Q06609 339 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 FCHO2Q0JRZ9 810 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 SMARCB1Q12824 385 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 PKP1Q13835 747 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 CYTH1Q15438 398 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 STK11Q15831 433 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 LETM2Q2VYF4 491 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 TRIM60Q495X7 471 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 TDRD12Q587J7 1177 aaKnown RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 CLVS2Q5SYC1 327 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 OR7E24Q6IFN5 339 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 RWDD4Q6NW29 188 aaKnown RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 TATDN1Q6P1N9 297 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 CCNI2Q6ZMN8 369 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 CCDC129Q6ZRS4 1044 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 RFPL4BQ6ZWI9 263 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 MARK2Q7KZI7 788 aaKnown RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 MIER3Q7Z3K6 550 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 BNIPLQ7Z465 357 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 ADAMTSL2Q86TH1 951 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 LONP2Q86WA8 852 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 KLBQ86Z14 1044 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 FBXL14Q8N1E6 418 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 ELMOD1Q8N336 334 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 FAM133AQ8N9E0 248 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 EIF1ADQ8N9N8 165 aaKnown RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 ATAD1Q8NBU5 361 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 OR8H1Q8NGG4 311 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 SLC2A14Q8TDB8 520 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 HCAR2Q8TDS4 363 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 CCDC12Q8WUD4 166 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 NELFBQ8WX92 580 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 ZNF606Q8WXB4 792 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 SEPT1Q8WYJ6 367 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 ATP2A3Q93084 1043 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 CEP170P1Q96L14 293 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 TSNARE1Q96NA8 513 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 PANX2Q96RD6 677 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 SELENOSQ9BQE4 189 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 PSD2Q9BQI7 771 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 ZPBPQ9BS86 351 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 SYT17Q9BSW7 474 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 KIFC3Q9BVG8 833 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 NUSAP1Q9BXS6 441 aaKnown RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 C6orf62Q9GZU0 229 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 DENND2DQ9H6A0 471 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 AAMDCQ9H7C9 122 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 LIN7CQ9NUP9 197 aaKnown RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 PANK4Q9NVE7 773 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 DDX43Q9NXZ2 648 aaKnown RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 HACD3Q9P035 362 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 TEKT2Q9UIF3 430 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 ERVK-11Q9UQG0 969 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 PPP2R2CQ9Y2T4 447 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 CAB39Q9Y376 341 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-219ENST00000534049 USH1CQ9Y6N9 552 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 ZNF831Q5JPB2 1677 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 ABCC12Q96J65 1359 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 PXDNLA1KZ92 1463 aa4.24□□□□□ -1.73
ITGB1-219ENST00000534049 IGSF1Q8N6C5 1336 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 ITGB4P16144 1822 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 FUOMA2VDF0 154 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 A6NNC1 897 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 PRSS47A8MTI9 375 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 H0YGN5 161 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 O00370 1275 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 PIP5K1BO14986 540 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 HDAC3O15379 428 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 TRAPPC3O43617 180 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 ECE2O60344 883 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 ACSL4O60488 711 aa4.23□□□□□ -1.73
ITGB1-219ENST00000534049 CCNT1O60563 726 aaKnown RBP4.23□□□□□ -1.73
ITGB1-219ENST00000534049 JRKO75564 520 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms