RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 MC4RP32245 332 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 HADHAP40939 763 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 GRIA1P42261 906 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 MAPK9P45984 424 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 CD97P48960 835 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 FNTAP49354 379 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 SARNPP82979 210 aaKnown RBP8.54□□□□□ -1.04
COPB1-210ENST00000533533 ITGA9Q13797 1035 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 MAP7Q14244 749 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 KIR2DS5Q14953 304 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 ZRANB3Q5FWF4 1079 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 PAPD7Q5XG87 772 aaKnown RBP8.54□□□□□ -1.04
COPB1-210ENST00000533533 PDPK2PQ6A1A2 396 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 TAS2R42Q7RTR8 314 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 SLC9B2Q86UD5 537 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 PLXDC1Q8IUK5 500 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 TRAPPC5Q8IUR0 188 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 PPHLN1Q8NEY8 458 aaKnown RBP8.54□□□□□ -1.04
COPB1-210ENST00000533533 ZNF592Q92610 1267 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 DNAJC1Q96KC8 554 aaKnown RBP8.54□□□□□ -1.04
COPB1-210ENST00000533533 C16orf45Q96MC5 204 aaPredicted RBP8.54□□□□□ -1.04
COPB1-210ENST00000533533 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.54□□□□□ -1.04
COPB1-210ENST00000533533 OSGEPL1Q9H4B0 414 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 RMI1Q9H9A7 625 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 ARNT2Q9HBZ2 717 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 TRIM39Q9HCM9 518 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 SIDT1Q9NXL6 827 aaKnown RBP8.54□□□□□ -1.04
COPB1-210ENST00000533533 ATXN10Q9UBB4 475 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 NFKBIL1Q9UBC1 381 aaPredicted RBP8.54□□□□□ -1.04
COPB1-210ENST00000533533 CPNE7Q9UBL6 633 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 ASIC3Q9UHC3 531 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 KCNK6Q9Y257 313 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 TP53TG5Q9Y2B4 290 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 PCDHB3Q9Y5E6 796 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 MRPS18BQ9Y676 258 aaKnown RBP8.54□□□□□ -1.04
COPB1-210ENST00000533533 KCNMB2Q9Y691 235 aa8.54□□□□□ -1.04
COPB1-210ENST00000533533 MN1Q10571 1320 aaPredicted RBP8.54□□□□□ -1.04
COPB1-210ENST00000533533 MDC1Q14676 2089 aaKnown RBP8.53□□□□□ -1.04
COPB1-210ENST00000533533 LRBAP50851 2863 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 SVILO95425 2214 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 CELSR2Q9HCU4 2923 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 HEATR9A2RTY3 570 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 LILRA5A6NI73 299 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 OR5K4A6NMS3 321 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 MKRN2OSH3BPM6 223 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 GOLGA8MH3BSY2 632 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 LDB2O43679 373 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 NUAK1O60285 661 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 SRP72O76094 671 aaKnown RBP8.53□□□□□ -1.04
COPB1-210ENST00000533533 SUN1O94901 812 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 NR1D1P20393 614 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 PBLDP30039 288 aaPredicted RBP8.53□□□□□ -1.04
COPB1-210ENST00000533533 ZNF140P52738 457 aaPredicted RBP8.53□□□□□ -1.04
COPB1-210ENST00000533533 ETF1P62495 437 aaKnown RBP8.53□□□□□ -1.04
COPB1-210ENST00000533533 FOXM1Q08050 763 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 TMEM115Q12893 351 aaPredicted RBP8.53□□□□□ -1.04
COPB1-210ENST00000533533 LAMB3Q13751 1172 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 CYP1B1Q16678 543 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 INSCQ1MX18 579 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 C4orf17Q53FE4 359 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 LDLRAP1Q5SW96 308 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 GPRC6AQ5T6X5 926 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 TCTN3Q6NUS6 607 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 CASC4Q6P4E1 433 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 DET1Q7L5Y6 550 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 ADGRG6Q86SQ4 1221 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 ATCAYQ86WG3 371 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 CREG2Q8IUH2 290 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 KLHDC8BQ8IXV7 354 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 TEX19Q8NA77 164 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 AVL9Q8NBF6 648 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 OR6P1Q8NGX9 317 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 STYXQ8WUJ0 223 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 DCUN1D1Q96GG9 259 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 VPS35Q96QK1 796 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 TBC1D10AQ9BXI6 508 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 ULBP3Q9BZM4 244 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 ZCCHC2Q9C0B9 1178 aaKnown RBP8.53□□□□□ -1.04
COPB1-210ENST00000533533 CASS4Q9NQ75 786 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 EIF2B3Q9NR50 452 aaKnown RBP8.53□□□□□ -1.04
COPB1-210ENST00000533533 BFARQ9NZS9 450 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 FAM8A1Q9UBU6 413 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 DNAJC16Q9Y2G8 782 aa8.53□□□□□ -1.04
COPB1-210ENST00000533533 TCRBV7S3A2A0A539 114 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 BLACEA4D250 179 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 OR2AG2A6NM03 316 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 K7EM74 188 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 AP3B1O00203 1094 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 KMOO15229 486 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 TOX3O15405 576 aaPredicted RBP8.52□□□□□ -1.05
COPB1-210ENST00000533533 VEGFDO43915 354 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 C9P02748 559 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 RALBP11234 206 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 ZNF28P17035 718 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 TPSB2P20231 275 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 ADRA1DP25100 572 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 MGAT1P26572 445 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 CA5AP35218 305 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 DLSTP36957 453 aa8.52□□□□□ -1.05
COPB1-210ENST00000533533 CLCNKAP51800 687 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms