RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 OR4E2Q8NGC2 313 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 ATG4AQ8WYN0 398 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 SLC41A2Q96JW4 573 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 RMDN2Q96LZ7 410 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 FRMD8P1Q9BZ68 369 aaPredicted RBP15.06■□□□□ 0
CPSF1-211ENST00000533492 SLC25A18Q9H1K4 315 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 ADNPQ9H2P0 1102 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 COG4Q9H9E3 785 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 STARD5Q9NSY2 213 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 PADI1Q9ULC6 663 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 ZNF148Q9UQR1 794 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 IGLV3-16A0A075B6K0 115 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 TRBV5-4A0A0C4DH59 114 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 CCDC78A2IDD5 438 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 ERI2A8K979 691 aaKnown RBP15.05■□□□□ -0
CPSF1-211ENST00000533492 E7EVH7 732 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 LIASO43766 372 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 KATNA1O75449 491 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 PRSS56P0CW18 603 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 FOLR1P15328 257 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 ITGB6P18564 788 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 FDFT1P37268 417 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 POLE2P56282 527 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 HSD11B2P80365 405 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 CDC20Q12834 499 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 CDH17Q12864 832 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 LAMB3Q13751 1172 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 KCNAB1Q14722 419 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 TMTC4Q5T4D3 741 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 PPP1R21Q6ZMI0 780 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 SLC13A5Q86YT5 568 aaPredicted RBP15.05■□□□□ -0
CPSF1-211ENST00000533492 CLDN19Q8N6F1 224 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 ACVR1CQ8NER5 493 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 OR52K1Q8NGK4 314 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 LCN9Q8WX39 176 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 FCRL4Q96PJ5 515 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 ETNK1Q9HBU6 452 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 FGF21Q9NSA1 209 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 SMARCAL1Q9NZC9 954 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 KCND3Q9UK17 655 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 CROTQ9UKG9 612 aa15.05■□□□□ -0
CPSF1-211ENST00000533492 AP2A2O94973 939 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 ZIC2O95409 532 aaPredicted RBP15.04■□□□□ -0
CPSF1-211ENST00000533492 ZBTB11O95625 1053 aaPredicted RBP15.04■□□□□ -0
CPSF1-211ENST00000533492 GSTM1P09488 218 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 EBLN1P0CF75 366 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 POLR2CP19387 275 aaPredicted RBP15.04■□□□□ -0
CPSF1-211ENST00000533492 MSNP26038 577 aaKnown RBP15.04■□□□□ -0
CPSF1-211ENST00000533492 ARCN1P48444 511 aaKnown RBP15.04■□□□□ -0
CPSF1-211ENST00000533492 GSTM4Q03013 218 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 KCNAB2Q13303 367 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 RPS6KA1Q15418 735 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 DEFB109BQ30KR1 87 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 CCDC38Q502W7 563 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 CARFQ8N187 725 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 D2HGDHQ8N465 521 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 C1orf54Q8WWF1 131 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.04■□□□□ -0
CPSF1-211ENST00000533492 SRMSQ9H3Y6 488 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 SOHLH2Q9NX45 425 aa15.04■□□□□ -0
CPSF1-211ENST00000533492 MRPS18BQ9Y676 258 aaKnown RBP15.04■□□□□ -0
CPSF1-211ENST00000533492 HEATR9A2RTY3 570 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 GSAPA4D1B5 854 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 GOLGA6L3A6NEY3 463 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 MROH6A6NGR9 719 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 MATN2O00339 956 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 QSOX1O00391 747 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 MAP3K7O43318 606 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 NTRK1P04629 796 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 CDH3P22223 829 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 F8A1P23610 371 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 OAS2P29728 719 aaKnown RBP15.03■□□□□ -0
CPSF1-211ENST00000533492 NSG1P42857 185 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 CD151P48509 253 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 KPNA2P52292 529 aaKnown RBP15.03■□□□□ -0
CPSF1-211ENST00000533492 NFKB2Q00653 900 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 RPA4Q13156 261 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 SNX1Q13596 522 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 OASLQ15646 514 aaKnown RBP15.03■□□□□ -0
CPSF1-211ENST00000533492 DBN1Q16643 649 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 CRTC2Q53ET0 693 aaPredicted RBP15.03■□□□□ -0
CPSF1-211ENST00000533492 PWWP2BQ6NUJ5 590 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 CERS6Q6ZMG9 384 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 MICALCLQ6ZW33 695 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 PIANPQ8IYJ0 282 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 CCDC89Q8N998 374 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 PHC3Q8NDX5 983 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 APOBEC4Q8WW27 367 aaKnown RBP15.03■□□□□ -0
CPSF1-211ENST00000533492 TTC1Q99614 292 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 OR52A5Q9H2C5 316 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 MVB12BQ9H7P6 319 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 LHX9Q9NQ69 397 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 KCND1Q9NSA2 647 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 TUBD1Q9UJT1 453 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 SPTA1P02549 2419 aa15.03■□□□□ -0
CPSF1-211ENST00000533492 PIKFYVEQ9Y2I7 2098 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 CCDC162PA2VCL2 907 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 OR51F1A6NGY5 319 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 ARHGAP6O43182 974 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 TIAF1O95411 115 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms