RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 MGAT1P26572 445 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 NMBRP28336 390 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 ETV5P41161 510 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 ABCG1P45844 678 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 SESN2P58004 480 aaPredicted RBP9.6□□□□□ -0.87
NUP98-220ENST00000533346 TLE3Q04726 772 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 BOP1Q14137 746 aaKnown RBP9.6□□□□□ -0.87
NUP98-220ENST00000533346 SEMA3AQ14563 771 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 SEPT7Q16181 437 aaKnown RBP9.6□□□□□ -0.87
NUP98-220ENST00000533346 RNASEH2BQ5TBB1 312 aaKnown RBP9.6□□□□□ -0.87
NUP98-220ENST00000533346 ZNF761Q86XN6 746 aaPredicted RBP9.6□□□□□ -0.87
NUP98-220ENST00000533346 SPACA3Q8IXA5 215 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 PPIL6Q8IXY8 311 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 ACVR1CQ8NER5 493 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 KCNE4Q8WWG9 221 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 NCSTNQ92542 709 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 UBXN4Q92575 508 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 MFSD3Q96ES6 412 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 ZDHHC12Q96GR4 267 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 SIGLEC10Q96LC7 697 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 C12orf66Q96MD2 445 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 FCRL4Q96PJ5 515 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 TSSK1BQ9BXA7 367 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 ASPSCR1Q9BZE9 553 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 CATSPERZQ9NTU4 200 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 SYBUQ9NX95 663 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 SMARCAL1Q9NZC9 954 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 CDYLQ9Y232 598 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 SDK2Q58EX2 2172 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 PRAMEF33A0A0G2JMD5 474 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 ZCWPW2A0A1B0GU75 182 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 CTAGE9A4FU28 777 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 OR5K3A6NET4 321 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 IFRD1O00458 451 aaPredicted RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 DNALI1O14645 258 aaPredicted RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 KPNA5O15131 536 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 CAPN5O15484 640 aaPredicted RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 SLCO2B1O94956 709 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 MSL3P1P0C860 447 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 CCL4P13236 92 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 PAMP19021 973 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 ITIH1P19827 911 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 CLN3Q13286 438 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 MAP7Q14244 749 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 IL11RAQ14626 422 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 TRIP13Q15645 432 aaPredicted RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 RNF187Q5TA31 235 aaPredicted RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 ANKRD22Q5VYY1 191 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 MRNIPQ6NTE8 343 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 CYB5D1Q6P9G0 228 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 PDZD3Q86UT5 571 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 TBC1D21Q8IYX1 336 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 SLC22A15Q8IZD6 547 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 LILRA3Q8N6C8 439 aaPredicted RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 LSM14AQ8ND56 463 aaKnown RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 RCBTB1Q8NDN9 531 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 SPDYE1Q8NFV5 336 aaPredicted RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 OR6P1Q8NGX9 317 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 ASZ1Q8WWH4 475 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 RSC1A1Q92681 617 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 TFGQ92734 400 aaPredicted RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 USP7Q93009 1102 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 COL26A1Q96A83 441 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 SLC41A2Q96JW4 573 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 PANX3Q96QZ0 392 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 CHRNA10Q9GZZ6 450 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 DDX47Q9H0S4 455 aaKnown RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 IMP3Q9NV31 184 aaKnown RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 OCIAD1Q9NX40 245 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 PISDQ9UG56 409 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 POLG2Q9UHN1 485 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 PSMD13Q9UNM6 376 aa9.59□□□□□ -0.87
NUP98-220ENST00000533346 TMEM184BQ9Y519 407 aaPredicted RBP9.59□□□□□ -0.87
NUP98-220ENST00000533346 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.59□□□□□ -0.87
NUP98-220ENST00000533346 BHMG1C9JSJ3 638 aaPredicted RBP9.58□□□□□ -0.88
NUP98-220ENST00000533346 H3BMM5 538 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 PFDN6O15212 129 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 OR1I1O60431 355 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 PRAMEF10O60809 474 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 AVILO75366 819 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 POLBP06746 335 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 FGF5P12034 268 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 HGFP14210 728 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 NELFEP18615 380 aaKnown RBP9.58□□□□□ -0.88
NUP98-220ENST00000533346 ITPKBP27987 946 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 AOAHP28039 575 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 PDHA2P29803 388 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 PBLDP30039 288 aaPredicted RBP9.58□□□□□ -0.88
NUP98-220ENST00000533346 CCR7P32248 378 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 PAFAH1B1P43034 410 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 GFERP55789 205 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 ETF1P62495 437 aaKnown RBP9.58□□□□□ -0.88
NUP98-220ENST00000533346 CRADDP78560 199 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 DHX34Q14147 1143 aaKnown RBP9.58□□□□□ -0.88
NUP98-220ENST00000533346 GBX1Q14549 363 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 ANKRD20A4Q4UJ75 823 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 DNAJC21Q5F1R6 531 aaKnown RBP9.58□□□□□ -0.88
NUP98-220ENST00000533346 DCAF12Q5T6F0 453 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 CEACAM20Q6UY09 585 aa9.58□□□□□ -0.88
NUP98-220ENST00000533346 SDCCAG8Q86SQ7 713 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms